Gene : Phvul.011G046000 P. vulgaris v2.1
Defline:  (1 of 2) K17267 - coatomer protein complex, subunit gamma (COPG) Genomic Order:  476
Name:  ? Phvul.011G046000 Secondary Identifier:  ? PAC:37155506
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.011G046000 0.5kb upstream 0.5kb upstream 8252 true Chr11: 4115205-4123456 Phaseolus vulgaris
Phvul.011G046000 0.5kb upstream 0.5kb upstream 500 false Chr11: 4122957-4123456 Phaseolus vulgaris
Phvul.011G046000 0.5kb downstream 0.5kb downstream 8252 true Chr11: 4114705-4122956 Phaseolus vulgaris
Phvul.011G046000 0.5kb downstream 0.5kb downstream 500 false Chr11: 4114705-4115204 Phaseolus vulgaris
Phvul.011G046000 1.0kb upstream 1.0kb upstream 8752 true Chr11: 4115205-4123956 Phaseolus vulgaris
Phvul.011G046000 1.0kb upstream 1.0kb upstream 1000 false Chr11: 4122957-4123956 Phaseolus vulgaris
Phvul.011G046000 1.0kb downstream 1.0kb downstream 8752 true Chr11: 4114205-4122956 Phaseolus vulgaris
Phvul.011G046000 1.0kb downstream 1.0kb downstream 1000 false Chr11: 4114205-4115204 Phaseolus vulgaris
Phvul.011G046000 2.0kb upstream 2.0kb upstream 9752 true Chr11: 4115205-4124956 Phaseolus vulgaris
Phvul.011G046000 2.0kb upstream 2.0kb upstream 2000 false Chr11: 4122957-4124956 Phaseolus vulgaris
Phvul.011G046000 2.0kb downstream 2.0kb downstream 9752 true Chr11: 4113205-4122956 Phaseolus vulgaris
Phvul.011G046000 2.0kb downstream 2.0kb downstream 2000 false Chr11: 4113205-4115204 Phaseolus vulgaris
Phvul.011G046000 5.0kb upstream 5.0kb upstream 12752 true Chr11: 4115205-4127956 Phaseolus vulgaris
Phvul.011G046000 5.0kb upstream 5.0kb upstream 5000 false Chr11: 4122957-4127956 Phaseolus vulgaris
Phvul.011G046000 5.0kb downstream 5.0kb downstream 12752 true Chr11: 4110205-4122956 Phaseolus vulgaris
Phvul.011G046000 5.0kb downstream 5.0kb downstream 5000 false Chr11: 4110205-4115204 Phaseolus vulgaris
Phvul.011G046000 10.0kb upstream 10.0kb upstream 17752 true Chr11: 4115205-4132956 Phaseolus vulgaris
Phvul.011G046000 10.0kb upstream 10.0kb upstream 10000 false Chr11: 4122957-4132956 Phaseolus vulgaris
Phvul.011G046000 10.0kb downstream 10.0kb downstream 17752 true Chr11: 4105205-4122956 Phaseolus vulgaris
Phvul.011G046000 10.0kb downstream 10.0kb downstream 10000 false Chr11: 4105205-4115204 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313608 5265 Fabidae View MSA
124064996 5270 Rosid View MSA
123745715 5271 Pentapetalae View MSA
122789783 5272 Eudicot View MSA
122043525 5273 Angiosperm View MSA
121350751 5274 Embryophyte View MSA
123428143 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.9355 0.0 36.0266   Low
cufflinks 40.1966 0.0 110.006 High  
cufflinks 34.3965 0.0 92.9638    
cufflinks 39.2633 0.0 106.619 High  
cufflinks 40.3193 0.0 109.792 High  
cufflinks 37.8713 0.0 103.109 High  
cufflinks 38.5805 0.0 105.12 High  
cufflinks 37.2119 0.0 101.31 High  
cufflinks 42.6243 0.0 117.105 High  
cufflinks 34.4709 0.0 92.9688    
cufflinks 44.208 0.0 121.533 High  

0 Strain