Gene : Phvul.011G046200 P. vulgaris v2.1
Defline:  (1 of 1) PTHR12802:SF39 - SWI/SNF COMPLEX SUBUNIT SWI3D Genomic Order:  478
Name:  ? Phvul.011G046200 Secondary Identifier:  ? PAC:37155265
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.011G046200 0.5kb upstream 0.5kb upstream 7650 true Chr11: 4132585-4140234 Phaseolus vulgaris
Phvul.011G046200 0.5kb upstream 0.5kb upstream 500 false Chr11: 4139735-4140234 Phaseolus vulgaris
Phvul.011G046200 0.5kb downstream 0.5kb downstream 7650 true Chr11: 4132085-4139734 Phaseolus vulgaris
Phvul.011G046200 0.5kb downstream 0.5kb downstream 500 false Chr11: 4132085-4132584 Phaseolus vulgaris
Phvul.011G046200 1.0kb upstream 1.0kb upstream 8150 true Chr11: 4132585-4140734 Phaseolus vulgaris
Phvul.011G046200 1.0kb upstream 1.0kb upstream 1000 false Chr11: 4139735-4140734 Phaseolus vulgaris
Phvul.011G046200 1.0kb downstream 1.0kb downstream 8150 true Chr11: 4131585-4139734 Phaseolus vulgaris
Phvul.011G046200 1.0kb downstream 1.0kb downstream 1000 false Chr11: 4131585-4132584 Phaseolus vulgaris
Phvul.011G046200 2.0kb upstream 2.0kb upstream 9150 true Chr11: 4132585-4141734 Phaseolus vulgaris
Phvul.011G046200 2.0kb upstream 2.0kb upstream 2000 false Chr11: 4139735-4141734 Phaseolus vulgaris
Phvul.011G046200 2.0kb downstream 2.0kb downstream 9150 true Chr11: 4130585-4139734 Phaseolus vulgaris
Phvul.011G046200 2.0kb downstream 2.0kb downstream 2000 false Chr11: 4130585-4132584 Phaseolus vulgaris
Phvul.011G046200 5.0kb upstream 5.0kb upstream 12150 true Chr11: 4132585-4144734 Phaseolus vulgaris
Phvul.011G046200 5.0kb upstream 5.0kb upstream 5000 false Chr11: 4139735-4144734 Phaseolus vulgaris
Phvul.011G046200 5.0kb downstream 5.0kb downstream 12150 true Chr11: 4127585-4139734 Phaseolus vulgaris
Phvul.011G046200 5.0kb downstream 5.0kb downstream 5000 false Chr11: 4127585-4132584 Phaseolus vulgaris
Phvul.011G046200 10.0kb upstream 10.0kb upstream 17150 true Chr11: 4132585-4149734 Phaseolus vulgaris
Phvul.011G046200 10.0kb upstream 10.0kb upstream 10000 false Chr11: 4139735-4149734 Phaseolus vulgaris
Phvul.011G046200 10.0kb downstream 10.0kb downstream 17150 true Chr11: 4122585-4139734 Phaseolus vulgaris
Phvul.011G046200 10.0kb downstream 10.0kb downstream 10000 false Chr11: 4122585-4132584 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304014 5265 Fabidae View MSA
124063098 5270 Rosid View MSA
123749102 5271 Pentapetalae View MSA
122792303 5272 Eudicot View MSA
122043104 5273 Angiosperm View MSA
121349137 5274 Embryophyte View MSA
123428437 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.70595 0.0 10.5167   Low
cufflinks 8.64149 0.0 30.9851    
cufflinks 12.7294 0.0 48.7986    
cufflinks 3.9273 0.0 15.9926   Low
cufflinks 7.30707 0.0 26.5861    
cufflinks 13.0606 0.0 50.2893    
cufflinks 10.6922 0.0 41.2992    
cufflinks 10.0003 0.0 38.5548    
cufflinks 11.4715 0.0 40.5992    
cufflinks 10.9394 0.0 42.2636    
cufflinks 5.91307 0.0 24.2196    

0 Strain