Gene : Phvul.011G031300 P. vulgaris v2.1
Defline:  (1 of 2) PF02620 - Uncharacterized ACR, COG1399 (DUF177) Genomic Order:  329
Name:  ? Phvul.011G031300 Secondary Identifier:  ? PAC:37156396
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.011G031300 0.5kb upstream 0.5kb upstream 3385 true Chr11: 2898649-2902033 Phaseolus vulgaris
Phvul.011G031300 0.5kb upstream 0.5kb upstream 500 false Chr11: 2898649-2899148 Phaseolus vulgaris
Phvul.011G031300 0.5kb downstream 0.5kb downstream 3385 true Chr11: 2899149-2902533 Phaseolus vulgaris
Phvul.011G031300 0.5kb downstream 0.5kb downstream 500 false Chr11: 2902034-2902533 Phaseolus vulgaris
Phvul.011G031300 1.0kb upstream 1.0kb upstream 3885 true Chr11: 2898149-2902033 Phaseolus vulgaris
Phvul.011G031300 1.0kb upstream 1.0kb upstream 1000 false Chr11: 2898149-2899148 Phaseolus vulgaris
Phvul.011G031300 1.0kb downstream 1.0kb downstream 3885 true Chr11: 2899149-2903033 Phaseolus vulgaris
Phvul.011G031300 1.0kb downstream 1.0kb downstream 1000 false Chr11: 2902034-2903033 Phaseolus vulgaris
Phvul.011G031300 2.0kb upstream 2.0kb upstream 4885 true Chr11: 2897149-2902033 Phaseolus vulgaris
Phvul.011G031300 2.0kb upstream 2.0kb upstream 2000 false Chr11: 2897149-2899148 Phaseolus vulgaris
Phvul.011G031300 2.0kb downstream 2.0kb downstream 4885 true Chr11: 2899149-2904033 Phaseolus vulgaris
Phvul.011G031300 2.0kb downstream 2.0kb downstream 2000 false Chr11: 2902034-2904033 Phaseolus vulgaris
Phvul.011G031300 5.0kb upstream 5.0kb upstream 7885 true Chr11: 2894149-2902033 Phaseolus vulgaris
Phvul.011G031300 5.0kb upstream 5.0kb upstream 5000 false Chr11: 2894149-2899148 Phaseolus vulgaris
Phvul.011G031300 5.0kb downstream 5.0kb downstream 7885 true Chr11: 2899149-2907033 Phaseolus vulgaris
Phvul.011G031300 5.0kb downstream 5.0kb downstream 5000 false Chr11: 2902034-2907033 Phaseolus vulgaris
Phvul.011G031300 10.0kb upstream 10.0kb upstream 12885 true Chr11: 2889149-2902033 Phaseolus vulgaris
Phvul.011G031300 10.0kb upstream 10.0kb upstream 10000 false Chr11: 2889149-2899148 Phaseolus vulgaris
Phvul.011G031300 10.0kb downstream 10.0kb downstream 12885 true Chr11: 2899149-2912033 Phaseolus vulgaris
Phvul.011G031300 10.0kb downstream 10.0kb downstream 10000 false Chr11: 2902034-2912033 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026421 5273 Angiosperm View MSA
122311850 5265 Fabidae View MSA
124066454 5270 Rosid View MSA
123747479 5271 Pentapetalae View MSA
122790250 5272 Eudicot View MSA
121347098 5274 Embryophyte View MSA
123380492 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.0597 0.0 43.3594    
cufflinks 7.48949 0.0 32.7425    
cufflinks 28.7892 0.0 96.3615   High
cufflinks 7.94907 0.0 34.5399    
cufflinks 5.49964 0.0 24.5228    
cufflinks 14.7306 0.0 55.0196    
cufflinks 0.382082 0.0 1.51183 Low Low
cufflinks 0.2419 0.0 0.98847 Low Low
cufflinks 0.487752 0.0 2.46695 Low Low
cufflinks 9.95436 0.0 40.4755    
cufflinks 4.59742 0.0 20.868    

0 Strain