Gene : Phvul.011G034800 P. vulgaris v2.1
Defline:  (1 of 6) PF06911 - Senescence-associated protein (Senescence) Genomic Order:  364
Name:  ? Phvul.011G034800 Secondary Identifier:  ? PAC:37155435
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.011G034800 0.5kb upstream 0.5kb upstream 2373 true Chr11: 3201902-3204274 Phaseolus vulgaris
Phvul.011G034800 0.5kb upstream 0.5kb upstream 500 false Chr11: 3201902-3202401 Phaseolus vulgaris
Phvul.011G034800 0.5kb downstream 0.5kb downstream 2373 true Chr11: 3202402-3204774 Phaseolus vulgaris
Phvul.011G034800 0.5kb downstream 0.5kb downstream 500 false Chr11: 3204275-3204774 Phaseolus vulgaris
Phvul.011G034800 1.0kb upstream 1.0kb upstream 2873 true Chr11: 3201402-3204274 Phaseolus vulgaris
Phvul.011G034800 1.0kb upstream 1.0kb upstream 1000 false Chr11: 3201402-3202401 Phaseolus vulgaris
Phvul.011G034800 1.0kb downstream 1.0kb downstream 2873 true Chr11: 3202402-3205274 Phaseolus vulgaris
Phvul.011G034800 1.0kb downstream 1.0kb downstream 1000 false Chr11: 3204275-3205274 Phaseolus vulgaris
Phvul.011G034800 2.0kb upstream 2.0kb upstream 3873 true Chr11: 3200402-3204274 Phaseolus vulgaris
Phvul.011G034800 2.0kb upstream 2.0kb upstream 2000 false Chr11: 3200402-3202401 Phaseolus vulgaris
Phvul.011G034800 2.0kb downstream 2.0kb downstream 3873 true Chr11: 3202402-3206274 Phaseolus vulgaris
Phvul.011G034800 2.0kb downstream 2.0kb downstream 2000 false Chr11: 3204275-3206274 Phaseolus vulgaris
Phvul.011G034800 5.0kb upstream 5.0kb upstream 6873 true Chr11: 3197402-3204274 Phaseolus vulgaris
Phvul.011G034800 5.0kb upstream 5.0kb upstream 5000 false Chr11: 3197402-3202401 Phaseolus vulgaris
Phvul.011G034800 5.0kb downstream 5.0kb downstream 6873 true Chr11: 3202402-3209274 Phaseolus vulgaris
Phvul.011G034800 5.0kb downstream 5.0kb downstream 5000 false Chr11: 3204275-3209274 Phaseolus vulgaris
Phvul.011G034800 10.0kb upstream 10.0kb upstream 11873 true Chr11: 3192402-3204274 Phaseolus vulgaris
Phvul.011G034800 10.0kb upstream 10.0kb upstream 10000 false Chr11: 3192402-3202401 Phaseolus vulgaris
Phvul.011G034800 10.0kb downstream 10.0kb downstream 11873 true Chr11: 3202402-3214274 Phaseolus vulgaris
Phvul.011G034800 10.0kb downstream 10.0kb downstream 10000 false Chr11: 3204275-3214274 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314180 5265 Fabidae View MSA
124072707 5270 Rosid View MSA
123750901 5271 Pentapetalae View MSA
122796418 5272 Eudicot View MSA
122046624 5273 Angiosperm View MSA
121350646 5274 Embryophyte View MSA
123428517 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.6212 0.0 37.9081   High
cufflinks 5.62553 0.0 15.4755    
cufflinks 1.31975 0.0 4.26598   Low
cufflinks 4.91316 0.0 13.7909    
cufflinks 3.14222 0.0 9.19826    
cufflinks 1.70234 0.0 5.3188    
cufflinks 4.19561 0.0 11.7893    
cufflinks 2.53542 0.0 7.55063    
cufflinks 1.7027 0.0 5.29045    
cufflinks 30.7558 0.0 80.2887   High
cufflinks 3.63343 0.0 10.3919    

0 Strain