Gene : Phvul.011G035300 P. vulgaris v2.1
Defline:  (1 of 4) PTHR23421:SF52 - BETA-GALACTOSIDASE 11-RELATED Genomic Order:  369
Name:  ? Phvul.011G035300 Secondary Identifier:  ? PAC:37155838
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.011G035300 0.5kb upstream 0.5kb upstream 4077 true Chr11: 3263066-3267142 Phaseolus vulgaris
Phvul.011G035300 0.5kb upstream 0.5kb upstream 500 false Chr11: 3266643-3267142 Phaseolus vulgaris
Phvul.011G035300 0.5kb downstream 0.5kb downstream 4077 true Chr11: 3262566-3266642 Phaseolus vulgaris
Phvul.011G035300 0.5kb downstream 0.5kb downstream 500 false Chr11: 3262566-3263065 Phaseolus vulgaris
Phvul.011G035300 1.0kb upstream 1.0kb upstream 4577 true Chr11: 3263066-3267642 Phaseolus vulgaris
Phvul.011G035300 1.0kb upstream 1.0kb upstream 1000 false Chr11: 3266643-3267642 Phaseolus vulgaris
Phvul.011G035300 1.0kb downstream 1.0kb downstream 4577 true Chr11: 3262066-3266642 Phaseolus vulgaris
Phvul.011G035300 1.0kb downstream 1.0kb downstream 1000 false Chr11: 3262066-3263065 Phaseolus vulgaris
Phvul.011G035300 2.0kb upstream 2.0kb upstream 5577 true Chr11: 3263066-3268642 Phaseolus vulgaris
Phvul.011G035300 2.0kb upstream 2.0kb upstream 2000 false Chr11: 3266643-3268642 Phaseolus vulgaris
Phvul.011G035300 2.0kb downstream 2.0kb downstream 5577 true Chr11: 3261066-3266642 Phaseolus vulgaris
Phvul.011G035300 2.0kb downstream 2.0kb downstream 2000 false Chr11: 3261066-3263065 Phaseolus vulgaris
Phvul.011G035300 5.0kb upstream 5.0kb upstream 8577 true Chr11: 3263066-3271642 Phaseolus vulgaris
Phvul.011G035300 5.0kb upstream 5.0kb upstream 5000 false Chr11: 3266643-3271642 Phaseolus vulgaris
Phvul.011G035300 5.0kb downstream 5.0kb downstream 8577 true Chr11: 3258066-3266642 Phaseolus vulgaris
Phvul.011G035300 5.0kb downstream 5.0kb downstream 5000 false Chr11: 3258066-3263065 Phaseolus vulgaris
Phvul.011G035300 10.0kb upstream 10.0kb upstream 13577 true Chr11: 3263066-3276642 Phaseolus vulgaris
Phvul.011G035300 10.0kb upstream 10.0kb upstream 10000 false Chr11: 3266643-3276642 Phaseolus vulgaris
Phvul.011G035300 10.0kb downstream 10.0kb downstream 13577 true Chr11: 3253066-3266642 Phaseolus vulgaris
Phvul.011G035300 10.0kb downstream 10.0kb downstream 10000 false Chr11: 3253066-3263065 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310069 5265 Fabidae View MSA
124073107 5270 Rosid View MSA
123750727 5271 Pentapetalae View MSA
122791084 5272 Eudicot View MSA
122042357 5273 Angiosperm View MSA
121309952 5274 Embryophyte View MSA
123347574 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.78012 0.0 5.57247   High
cufflinks 0.0477856 0.0 0.209295 Low  
cufflinks 0.0356745 0.0 0.160106 Low  
cufflinks 0.0614012 0.0 0.261412 Low  
cufflinks 0.155178 0.0 0.610838 Low  
cufflinks 0.0166546 0.0 0.0808941 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0288648 0.0 0.132986 Low  

0 Strain