Gene : Phvul.011G032900 P. vulgaris v2.1
Defline:  (1 of 3) PF12579 - Protein of unknown function (DUF3755) (DUF3755) Genomic Order:  345
Name:  ? Phvul.011G032900 Secondary Identifier:  ? PAC:37156526
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.011G032900 0.5kb upstream 0.5kb upstream 7400 true Chr11: 3027864-3035263 Phaseolus vulgaris
Phvul.011G032900 0.5kb upstream 0.5kb upstream 500 false Chr11: 3034764-3035263 Phaseolus vulgaris
Phvul.011G032900 0.5kb downstream 0.5kb downstream 7400 true Chr11: 3027364-3034763 Phaseolus vulgaris
Phvul.011G032900 0.5kb downstream 0.5kb downstream 500 false Chr11: 3027364-3027863 Phaseolus vulgaris
Phvul.011G032900 1.0kb upstream 1.0kb upstream 7900 true Chr11: 3027864-3035763 Phaseolus vulgaris
Phvul.011G032900 1.0kb upstream 1.0kb upstream 1000 false Chr11: 3034764-3035763 Phaseolus vulgaris
Phvul.011G032900 1.0kb downstream 1.0kb downstream 7900 true Chr11: 3026864-3034763 Phaseolus vulgaris
Phvul.011G032900 1.0kb downstream 1.0kb downstream 1000 false Chr11: 3026864-3027863 Phaseolus vulgaris
Phvul.011G032900 2.0kb upstream 2.0kb upstream 8900 true Chr11: 3027864-3036763 Phaseolus vulgaris
Phvul.011G032900 2.0kb upstream 2.0kb upstream 2000 false Chr11: 3034764-3036763 Phaseolus vulgaris
Phvul.011G032900 2.0kb downstream 2.0kb downstream 8900 true Chr11: 3025864-3034763 Phaseolus vulgaris
Phvul.011G032900 2.0kb downstream 2.0kb downstream 2000 false Chr11: 3025864-3027863 Phaseolus vulgaris
Phvul.011G032900 5.0kb upstream 5.0kb upstream 11900 true Chr11: 3027864-3039763 Phaseolus vulgaris
Phvul.011G032900 5.0kb upstream 5.0kb upstream 5000 false Chr11: 3034764-3039763 Phaseolus vulgaris
Phvul.011G032900 5.0kb downstream 5.0kb downstream 11900 true Chr11: 3022864-3034763 Phaseolus vulgaris
Phvul.011G032900 5.0kb downstream 5.0kb downstream 5000 false Chr11: 3022864-3027863 Phaseolus vulgaris
Phvul.011G032900 10.0kb upstream 10.0kb upstream 16900 true Chr11: 3027864-3044763 Phaseolus vulgaris
Phvul.011G032900 10.0kb upstream 10.0kb upstream 10000 false Chr11: 3034764-3044763 Phaseolus vulgaris
Phvul.011G032900 10.0kb downstream 10.0kb downstream 16900 true Chr11: 3017864-3034763 Phaseolus vulgaris
Phvul.011G032900 10.0kb downstream 10.0kb downstream 10000 false Chr11: 3017864-3027863 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299748 5265 Fabidae View MSA
124060862 5270 Rosid View MSA
123751212 5271 Pentapetalae View MSA
122789009 5272 Eudicot View MSA
122047918 5273 Angiosperm View MSA
121349043 5274 Embryophyte View MSA
123381139 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 18.6861 0.0 48.4449    
cufflinks 18.5095 0.0 48.0184    
cufflinks 22.8595 0.0 59.0925   High
cufflinks 16.668 0.0 43.5173    
cufflinks 19.9675 0.0 51.7662    
cufflinks 20.8322 0.0 53.9158    
cufflinks 15.5949 0.0 40.716   Low
cufflinks 15.9818 0.0 41.5961   Low
cufflinks 16.4872 0.0 43.0031    
cufflinks 22.852 0.0 59.0813   High
cufflinks 20.4437 0.0 52.9679    

0 Strain