Gene : Phvul.011G033800 P. vulgaris v2.1
Defline:  (1 of 1) PTHR24078:SF166 - LD21896P Genomic Order:  353
Name:  ? Phvul.011G033800 Secondary Identifier:  ? PAC:37156039
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.011G033800 0.5kb upstream 0.5kb upstream 818 true Chr11: 3106798-3107615 Phaseolus vulgaris
Phvul.011G033800 0.5kb upstream 0.5kb upstream 500 false Chr11: 3106798-3107297 Phaseolus vulgaris
Phvul.011G033800 0.5kb downstream 0.5kb downstream 818 true Chr11: 3107298-3108115 Phaseolus vulgaris
Phvul.011G033800 0.5kb downstream 0.5kb downstream 500 false Chr11: 3107616-3108115 Phaseolus vulgaris
Phvul.011G033800 1.0kb upstream 1.0kb upstream 1318 true Chr11: 3106298-3107615 Phaseolus vulgaris
Phvul.011G033800 1.0kb upstream 1.0kb upstream 1000 false Chr11: 3106298-3107297 Phaseolus vulgaris
Phvul.011G033800 1.0kb downstream 1.0kb downstream 1318 true Chr11: 3107298-3108615 Phaseolus vulgaris
Phvul.011G033800 1.0kb downstream 1.0kb downstream 1000 false Chr11: 3107616-3108615 Phaseolus vulgaris
Phvul.011G033800 2.0kb upstream 2.0kb upstream 2318 true Chr11: 3105298-3107615 Phaseolus vulgaris
Phvul.011G033800 2.0kb upstream 2.0kb upstream 2000 false Chr11: 3105298-3107297 Phaseolus vulgaris
Phvul.011G033800 2.0kb downstream 2.0kb downstream 2318 true Chr11: 3107298-3109615 Phaseolus vulgaris
Phvul.011G033800 2.0kb downstream 2.0kb downstream 2000 false Chr11: 3107616-3109615 Phaseolus vulgaris
Phvul.011G033800 5.0kb upstream 5.0kb upstream 5318 true Chr11: 3102298-3107615 Phaseolus vulgaris
Phvul.011G033800 5.0kb upstream 5.0kb upstream 5000 false Chr11: 3102298-3107297 Phaseolus vulgaris
Phvul.011G033800 5.0kb downstream 5.0kb downstream 5318 true Chr11: 3107298-3112615 Phaseolus vulgaris
Phvul.011G033800 5.0kb downstream 5.0kb downstream 5000 false Chr11: 3107616-3112615 Phaseolus vulgaris
Phvul.011G033800 10.0kb upstream 10.0kb upstream 10318 true Chr11: 3097298-3107615 Phaseolus vulgaris
Phvul.011G033800 10.0kb upstream 10.0kb upstream 10000 false Chr11: 3097298-3107297 Phaseolus vulgaris
Phvul.011G033800 10.0kb downstream 10.0kb downstream 10318 true Chr11: 3107298-3117615 Phaseolus vulgaris
Phvul.011G033800 10.0kb downstream 10.0kb downstream 10000 false Chr11: 3107616-3117615 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314197 5265 Fabidae View MSA
124071980 5270 Rosid View MSA
123753518 5271 Pentapetalae View MSA
122797813 5272 Eudicot View MSA
122049944 5273 Angiosperm View MSA
123429067 5275 Viridiplantae View MSA
121350989 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 119.787 0.0 333.82 High High
cufflinks 84.7176 0.0 243.632 High High
cufflinks 15.6435 0.0 54.351    
cufflinks 30.0777 0.0 96.6437    
cufflinks 9.13812 0.0 33.8489    
cufflinks 2.94316 0.0 11.8151    
cufflinks 1.09467 0.0 4.78873   Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.16551 0.0 5.06173   Low
cufflinks 85.6129 0.0 247.971 High High
cufflinks 6.47019 0.0 24.5144    

0 Strain