Gene : Phvul.011G037800 P. vulgaris v2.1
Defline:  (1 of 2) K11341 - YEATS domain-containing protein 4 (YEATS4, GAS41, YAF9) Genomic Order:  394
Name:  ? Phvul.011G037800 Secondary Identifier:  ? PAC:37154775
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.011G037800 0.5kb upstream 0.5kb upstream 3968 true Chr11: 3445170-3449137 Phaseolus vulgaris
Phvul.011G037800 0.5kb upstream 0.5kb upstream 500 false Chr11: 3445170-3445669 Phaseolus vulgaris
Phvul.011G037800 0.5kb downstream 0.5kb downstream 3968 true Chr11: 3445670-3449637 Phaseolus vulgaris
Phvul.011G037800 0.5kb downstream 0.5kb downstream 500 false Chr11: 3449138-3449637 Phaseolus vulgaris
Phvul.011G037800 1.0kb upstream 1.0kb upstream 4468 true Chr11: 3444670-3449137 Phaseolus vulgaris
Phvul.011G037800 1.0kb upstream 1.0kb upstream 1000 false Chr11: 3444670-3445669 Phaseolus vulgaris
Phvul.011G037800 1.0kb downstream 1.0kb downstream 4468 true Chr11: 3445670-3450137 Phaseolus vulgaris
Phvul.011G037800 1.0kb downstream 1.0kb downstream 1000 false Chr11: 3449138-3450137 Phaseolus vulgaris
Phvul.011G037800 2.0kb upstream 2.0kb upstream 5468 true Chr11: 3443670-3449137 Phaseolus vulgaris
Phvul.011G037800 2.0kb upstream 2.0kb upstream 2000 false Chr11: 3443670-3445669 Phaseolus vulgaris
Phvul.011G037800 2.0kb downstream 2.0kb downstream 5468 true Chr11: 3445670-3451137 Phaseolus vulgaris
Phvul.011G037800 2.0kb downstream 2.0kb downstream 2000 false Chr11: 3449138-3451137 Phaseolus vulgaris
Phvul.011G037800 5.0kb upstream 5.0kb upstream 8468 true Chr11: 3440670-3449137 Phaseolus vulgaris
Phvul.011G037800 5.0kb upstream 5.0kb upstream 5000 false Chr11: 3440670-3445669 Phaseolus vulgaris
Phvul.011G037800 5.0kb downstream 5.0kb downstream 8468 true Chr11: 3445670-3454137 Phaseolus vulgaris
Phvul.011G037800 5.0kb downstream 5.0kb downstream 5000 false Chr11: 3449138-3454137 Phaseolus vulgaris
Phvul.011G037800 10.0kb upstream 10.0kb upstream 13468 true Chr11: 3435670-3449137 Phaseolus vulgaris
Phvul.011G037800 10.0kb upstream 10.0kb upstream 10000 false Chr11: 3435670-3445669 Phaseolus vulgaris
Phvul.011G037800 10.0kb downstream 10.0kb downstream 13468 true Chr11: 3445670-3459137 Phaseolus vulgaris
Phvul.011G037800 10.0kb downstream 10.0kb downstream 10000 false Chr11: 3449138-3459137 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304284 5265 Fabidae View MSA
124070032 5270 Rosid View MSA
123737599 5271 Pentapetalae View MSA
122789649 5272 Eudicot View MSA
122044326 5273 Angiosperm View MSA
121346764 5274 Embryophyte View MSA
123428525 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.55964 0.0 11.17    
cufflinks 4.22666 0.0 13.0019    
cufflinks 3.89369 0.0 12.0694    
cufflinks 3.24347 0.0 10.3576   Low
cufflinks 3.56023 0.0 11.2564    
cufflinks 3.54053 0.0 11.1148    
cufflinks 4.00645 0.0 12.3722    
cufflinks 5.97984 0.0 17.5746   High
cufflinks 5.77599 0.0 17.1393   High
cufflinks 3.51392 0.0 11.067    
cufflinks 3.71578 0.0 11.6503    

0 Strain