Gene : Phvul.011G038200 P. vulgaris v2.1
Defline:  (1 of 2) PTHR13690:SF76 - BASIC-LEUCINE ZIPPER (BZIP) TRANSCRIPTION FACTOR FAMILY PROTEIN Genomic Order:  398
Name:  ? Phvul.011G038200 Secondary Identifier:  ? PAC:37155884
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.011G038200 0.5kb upstream 0.5kb upstream 4451 true Chr11: 3480932-3485382 Phaseolus vulgaris
Phvul.011G038200 0.5kb upstream 0.5kb upstream 500 false Chr11: 3484883-3485382 Phaseolus vulgaris
Phvul.011G038200 0.5kb downstream 0.5kb downstream 4451 true Chr11: 3480432-3484882 Phaseolus vulgaris
Phvul.011G038200 0.5kb downstream 0.5kb downstream 500 false Chr11: 3480432-3480931 Phaseolus vulgaris
Phvul.011G038200 1.0kb upstream 1.0kb upstream 4951 true Chr11: 3480932-3485882 Phaseolus vulgaris
Phvul.011G038200 1.0kb upstream 1.0kb upstream 1000 false Chr11: 3484883-3485882 Phaseolus vulgaris
Phvul.011G038200 1.0kb downstream 1.0kb downstream 4951 true Chr11: 3479932-3484882 Phaseolus vulgaris
Phvul.011G038200 1.0kb downstream 1.0kb downstream 1000 false Chr11: 3479932-3480931 Phaseolus vulgaris
Phvul.011G038200 2.0kb upstream 2.0kb upstream 5951 true Chr11: 3480932-3486882 Phaseolus vulgaris
Phvul.011G038200 2.0kb upstream 2.0kb upstream 2000 false Chr11: 3484883-3486882 Phaseolus vulgaris
Phvul.011G038200 2.0kb downstream 2.0kb downstream 5951 true Chr11: 3478932-3484882 Phaseolus vulgaris
Phvul.011G038200 2.0kb downstream 2.0kb downstream 2000 false Chr11: 3478932-3480931 Phaseolus vulgaris
Phvul.011G038200 5.0kb upstream 5.0kb upstream 8951 true Chr11: 3480932-3489882 Phaseolus vulgaris
Phvul.011G038200 5.0kb upstream 5.0kb upstream 5000 false Chr11: 3484883-3489882 Phaseolus vulgaris
Phvul.011G038200 5.0kb downstream 5.0kb downstream 8951 true Chr11: 3475932-3484882 Phaseolus vulgaris
Phvul.011G038200 5.0kb downstream 5.0kb downstream 5000 false Chr11: 3475932-3480931 Phaseolus vulgaris
Phvul.011G038200 10.0kb upstream 10.0kb upstream 13951 true Chr11: 3480932-3494882 Phaseolus vulgaris
Phvul.011G038200 10.0kb upstream 10.0kb upstream 10000 false Chr11: 3484883-3494882 Phaseolus vulgaris
Phvul.011G038200 10.0kb downstream 10.0kb downstream 13951 true Chr11: 3470932-3484882 Phaseolus vulgaris
Phvul.011G038200 10.0kb downstream 10.0kb downstream 10000 false Chr11: 3470932-3480931 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305737 5265 Fabidae View MSA
124066313 5270 Rosid View MSA
123743567 5271 Pentapetalae View MSA
122796613 5272 Eudicot View MSA
122046489 5273 Angiosperm View MSA
123428913 5275 Viridiplantae View MSA
121310613 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.9978 0.0 33.6368   Low
cufflinks 21.9491 0.0 57.0591    
cufflinks 33.5317 0.0 89.029   High
cufflinks 23.4397 0.0 61.0543    
cufflinks 28.8427 0.0 75.9189    
cufflinks 20.8717 0.0 54.1775    
cufflinks 23.083 0.0 60.3584    
cufflinks 31.5651 0.0 84.0255 High High
cufflinks 18.6737 0.0 48.4213    
cufflinks 23.5113 0.0 61.2324    
cufflinks 28.7812 0.0 75.8381    

0 Strain