Gene : Phvul.011G023300 P. vulgaris v2.1
Defline:  (1 of 1) K01012 - biotin synthase (bioB) Genomic Order:  236
Name:  ? Phvul.011G023300 Secondary Identifier:  ? PAC:37156193
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY0-1507 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.011G023300 0.5kb upstream 0.5kb upstream 4483 true Chr11: 1849769-1854251 Phaseolus vulgaris
Phvul.011G023300 0.5kb upstream 0.5kb upstream 500 false Chr11: 1849769-1850268 Phaseolus vulgaris
Phvul.011G023300 0.5kb downstream 0.5kb downstream 4483 true Chr11: 1850269-1854751 Phaseolus vulgaris
Phvul.011G023300 0.5kb downstream 0.5kb downstream 500 false Chr11: 1854252-1854751 Phaseolus vulgaris
Phvul.011G023300 1.0kb upstream 1.0kb upstream 4983 true Chr11: 1849269-1854251 Phaseolus vulgaris
Phvul.011G023300 1.0kb upstream 1.0kb upstream 1000 false Chr11: 1849269-1850268 Phaseolus vulgaris
Phvul.011G023300 1.0kb downstream 1.0kb downstream 4983 true Chr11: 1850269-1855251 Phaseolus vulgaris
Phvul.011G023300 1.0kb downstream 1.0kb downstream 1000 false Chr11: 1854252-1855251 Phaseolus vulgaris
Phvul.011G023300 2.0kb upstream 2.0kb upstream 5983 true Chr11: 1848269-1854251 Phaseolus vulgaris
Phvul.011G023300 2.0kb upstream 2.0kb upstream 2000 false Chr11: 1848269-1850268 Phaseolus vulgaris
Phvul.011G023300 2.0kb downstream 2.0kb downstream 5983 true Chr11: 1850269-1856251 Phaseolus vulgaris
Phvul.011G023300 2.0kb downstream 2.0kb downstream 2000 false Chr11: 1854252-1856251 Phaseolus vulgaris
Phvul.011G023300 5.0kb upstream 5.0kb upstream 8983 true Chr11: 1845269-1854251 Phaseolus vulgaris
Phvul.011G023300 5.0kb upstream 5.0kb upstream 5000 false Chr11: 1845269-1850268 Phaseolus vulgaris
Phvul.011G023300 5.0kb downstream 5.0kb downstream 8983 true Chr11: 1850269-1859251 Phaseolus vulgaris
Phvul.011G023300 5.0kb downstream 5.0kb downstream 5000 false Chr11: 1854252-1859251 Phaseolus vulgaris
Phvul.011G023300 10.0kb upstream 10.0kb upstream 13983 true Chr11: 1840269-1854251 Phaseolus vulgaris
Phvul.011G023300 10.0kb upstream 10.0kb upstream 10000 false Chr11: 1840269-1850268 Phaseolus vulgaris
Phvul.011G023300 10.0kb downstream 10.0kb downstream 13983 true Chr11: 1850269-1864251 Phaseolus vulgaris
Phvul.011G023300 10.0kb downstream 10.0kb downstream 10000 false Chr11: 1854252-1864251 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308506 5265 Fabidae View MSA
124069050 5270 Rosid View MSA
123738436 5271 Pentapetalae View MSA
122791352 5272 Eudicot View MSA
122044097 5273 Angiosperm View MSA
121346101 5274 Embryophyte View MSA
123424620 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 19.5842 0.0 50.7712    
cufflinks 15.2034 0.0 39.7868    
cufflinks 21.3556 0.0 55.2718    
cufflinks 77.357 0.0 210.915 High High
cufflinks 12.4888 0.0 33.1571    
cufflinks 21.9831 0.0 56.878    
cufflinks 12.4929 0.0 32.9903    
cufflinks 17.3032 0.0 44.9722    
cufflinks 13.0351 0.0 34.3541    
cufflinks 12.8984 0.0 34.1179    
cufflinks 13.5457 0.0 35.75    

0 Strain