Gene : Phvul.011G027700 P. vulgaris v2.1
Defline:  (1 of 7) K02935 - large subunit ribosomal protein L7/L12 (RP-L7, MRPL12, rplL) Genomic Order:  294
Name:  ? Phvul.011G027700 Secondary Identifier:  ? PAC:37155979
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.011G027700 0.5kb upstream 0.5kb upstream 1607 true Chr11: 2405776-2407382 Phaseolus vulgaris
Phvul.011G027700 0.5kb upstream 0.5kb upstream 500 false Chr11: 2406883-2407382 Phaseolus vulgaris
Phvul.011G027700 0.5kb downstream 0.5kb downstream 1607 true Chr11: 2405276-2406882 Phaseolus vulgaris
Phvul.011G027700 0.5kb downstream 0.5kb downstream 500 false Chr11: 2405276-2405775 Phaseolus vulgaris
Phvul.011G027700 1.0kb upstream 1.0kb upstream 2107 true Chr11: 2405776-2407882 Phaseolus vulgaris
Phvul.011G027700 1.0kb upstream 1.0kb upstream 1000 false Chr11: 2406883-2407882 Phaseolus vulgaris
Phvul.011G027700 1.0kb downstream 1.0kb downstream 2107 true Chr11: 2404776-2406882 Phaseolus vulgaris
Phvul.011G027700 1.0kb downstream 1.0kb downstream 1000 false Chr11: 2404776-2405775 Phaseolus vulgaris
Phvul.011G027700 2.0kb upstream 2.0kb upstream 3107 true Chr11: 2405776-2408882 Phaseolus vulgaris
Phvul.011G027700 2.0kb upstream 2.0kb upstream 2000 false Chr11: 2406883-2408882 Phaseolus vulgaris
Phvul.011G027700 2.0kb downstream 2.0kb downstream 3107 true Chr11: 2403776-2406882 Phaseolus vulgaris
Phvul.011G027700 2.0kb downstream 2.0kb downstream 2000 false Chr11: 2403776-2405775 Phaseolus vulgaris
Phvul.011G027700 5.0kb upstream 5.0kb upstream 6107 true Chr11: 2405776-2411882 Phaseolus vulgaris
Phvul.011G027700 5.0kb upstream 5.0kb upstream 5000 false Chr11: 2406883-2411882 Phaseolus vulgaris
Phvul.011G027700 5.0kb downstream 5.0kb downstream 6107 true Chr11: 2400776-2406882 Phaseolus vulgaris
Phvul.011G027700 5.0kb downstream 5.0kb downstream 5000 false Chr11: 2400776-2405775 Phaseolus vulgaris
Phvul.011G027700 10.0kb upstream 10.0kb upstream 11107 true Chr11: 2405776-2416882 Phaseolus vulgaris
Phvul.011G027700 10.0kb upstream 10.0kb upstream 10000 false Chr11: 2406883-2416882 Phaseolus vulgaris
Phvul.011G027700 10.0kb downstream 10.0kb downstream 11107 true Chr11: 2395776-2406882 Phaseolus vulgaris
Phvul.011G027700 10.0kb downstream 10.0kb downstream 10000 false Chr11: 2395776-2405775 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300835 5265 Fabidae View MSA
124063045 5270 Rosid View MSA
123741496 5271 Pentapetalae View MSA
122791923 5272 Eudicot View MSA
122049656 5273 Angiosperm View MSA
121351043 5274 Embryophyte View MSA
123427211 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 249.167 0.0 884.983 High  
cufflinks 295.24 0.0 1060.11 High  
cufflinks 1522.72 0.0 11381.4 High High
cufflinks 226.321 0.0 796.702 High  
cufflinks 188.578 0.0 624.508 High  
cufflinks 732.576 0.0 3803.97 High High
cufflinks 19.529 0.0 60.0307   Low
cufflinks 28.7137 0.0 83.376 High Low
cufflinks 26.4727 0.0 77.3333   Low
cufflinks 105.711 0.0 351.589 High  
cufflinks 115.809 0.0 374.565 High  

0 Strain