Gene : Phvul.011G024801 P. vulgaris v2.1
Defline:  (1 of 1) PTHR31692:SF4 - EXPANSIN-LIKE A1-RELATED Genomic Order:  267
Name:  ? Phvul.011G024801 Secondary Identifier:  ? PAC:37156640
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.011G024801 0.5kb upstream 0.5kb upstream 2304 true Chr11: 2237181-2239484 Phaseolus vulgaris
Phvul.011G024801 0.5kb upstream 0.5kb upstream 500 false Chr11: 2238985-2239484 Phaseolus vulgaris
Phvul.011G024801 0.5kb downstream 0.5kb downstream 2304 true Chr11: 2236681-2238984 Phaseolus vulgaris
Phvul.011G024801 0.5kb downstream 0.5kb downstream 500 false Chr11: 2236681-2237180 Phaseolus vulgaris
Phvul.011G024801 1.0kb upstream 1.0kb upstream 2804 true Chr11: 2237181-2239984 Phaseolus vulgaris
Phvul.011G024801 1.0kb upstream 1.0kb upstream 1000 false Chr11: 2238985-2239984 Phaseolus vulgaris
Phvul.011G024801 1.0kb downstream 1.0kb downstream 2804 true Chr11: 2236181-2238984 Phaseolus vulgaris
Phvul.011G024801 1.0kb downstream 1.0kb downstream 1000 false Chr11: 2236181-2237180 Phaseolus vulgaris
Phvul.011G024801 2.0kb upstream 2.0kb upstream 3804 true Chr11: 2237181-2240984 Phaseolus vulgaris
Phvul.011G024801 2.0kb upstream 2.0kb upstream 2000 false Chr11: 2238985-2240984 Phaseolus vulgaris
Phvul.011G024801 2.0kb downstream 2.0kb downstream 3804 true Chr11: 2235181-2238984 Phaseolus vulgaris
Phvul.011G024801 2.0kb downstream 2.0kb downstream 2000 false Chr11: 2235181-2237180 Phaseolus vulgaris
Phvul.011G024801 5.0kb upstream 5.0kb upstream 6804 true Chr11: 2237181-2243984 Phaseolus vulgaris
Phvul.011G024801 5.0kb upstream 5.0kb upstream 5000 false Chr11: 2238985-2243984 Phaseolus vulgaris
Phvul.011G024801 5.0kb downstream 5.0kb downstream 6804 true Chr11: 2232181-2238984 Phaseolus vulgaris
Phvul.011G024801 5.0kb downstream 5.0kb downstream 5000 false Chr11: 2232181-2237180 Phaseolus vulgaris
Phvul.011G024801 10.0kb upstream 10.0kb upstream 11804 true Chr11: 2237181-2248984 Phaseolus vulgaris
Phvul.011G024801 10.0kb upstream 10.0kb upstream 10000 false Chr11: 2238985-2248984 Phaseolus vulgaris
Phvul.011G024801 10.0kb downstream 10.0kb downstream 11804 true Chr11: 2227181-2238984 Phaseolus vulgaris
Phvul.011G024801 10.0kb downstream 10.0kb downstream 10000 false Chr11: 2227181-2237180 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299918 5265 Fabidae View MSA
124063116 5270 Rosid View MSA
123739587 5271 Pentapetalae View MSA
122785615 5272 Eudicot View MSA
122042929 5273 Angiosperm View MSA
121310045 5274 Embryophyte View MSA
123347644 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 85.8727 0.0 228.934 High High
cufflinks 15.8635 0.0 42.5421    
cufflinks 11.9054 0.0 32.6707    
cufflinks 34.7768 0.0 89.9967 High  
cufflinks 13.7236 0.0 37.4157    
cufflinks 55.4587 0.0 144.192 High High
cufflinks 9.76586 0.0 27.2264    
cufflinks 5.01288 0.0 14.9438   Low
cufflinks 16.3342 0.0 43.6541    
cufflinks 24.0537 0.0 62.9098    
cufflinks 29.9161 0.0 77.6388    

0 Strain