Gene : Phvul.011G030300 P. vulgaris v2.1
Defline:  (1 of 1) PTHR22298:SF41 - ENDOGLUCANASE 5 Genomic Order:  319
Name:  ? Phvul.011G030300 Secondary Identifier:  ? PAC:37157202
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.011G030300 0.5kb upstream 0.5kb upstream 5488 true Chr11: 2735572-2741059 Phaseolus vulgaris
Phvul.011G030300 0.5kb upstream 0.5kb upstream 500 false Chr11: 2735572-2736071 Phaseolus vulgaris
Phvul.011G030300 0.5kb downstream 0.5kb downstream 5488 true Chr11: 2736072-2741559 Phaseolus vulgaris
Phvul.011G030300 0.5kb downstream 0.5kb downstream 500 false Chr11: 2741060-2741559 Phaseolus vulgaris
Phvul.011G030300 1.0kb upstream 1.0kb upstream 5988 true Chr11: 2735072-2741059 Phaseolus vulgaris
Phvul.011G030300 1.0kb upstream 1.0kb upstream 1000 false Chr11: 2735072-2736071 Phaseolus vulgaris
Phvul.011G030300 1.0kb downstream 1.0kb downstream 5988 true Chr11: 2736072-2742059 Phaseolus vulgaris
Phvul.011G030300 1.0kb downstream 1.0kb downstream 1000 false Chr11: 2741060-2742059 Phaseolus vulgaris
Phvul.011G030300 2.0kb upstream 2.0kb upstream 6988 true Chr11: 2734072-2741059 Phaseolus vulgaris
Phvul.011G030300 2.0kb upstream 2.0kb upstream 2000 false Chr11: 2734072-2736071 Phaseolus vulgaris
Phvul.011G030300 2.0kb downstream 2.0kb downstream 6988 true Chr11: 2736072-2743059 Phaseolus vulgaris
Phvul.011G030300 2.0kb downstream 2.0kb downstream 2000 false Chr11: 2741060-2743059 Phaseolus vulgaris
Phvul.011G030300 5.0kb upstream 5.0kb upstream 9988 true Chr11: 2731072-2741059 Phaseolus vulgaris
Phvul.011G030300 5.0kb upstream 5.0kb upstream 5000 false Chr11: 2731072-2736071 Phaseolus vulgaris
Phvul.011G030300 5.0kb downstream 5.0kb downstream 9988 true Chr11: 2736072-2746059 Phaseolus vulgaris
Phvul.011G030300 5.0kb downstream 5.0kb downstream 5000 false Chr11: 2741060-2746059 Phaseolus vulgaris
Phvul.011G030300 10.0kb upstream 10.0kb upstream 14988 true Chr11: 2726072-2741059 Phaseolus vulgaris
Phvul.011G030300 10.0kb upstream 10.0kb upstream 10000 false Chr11: 2726072-2736071 Phaseolus vulgaris
Phvul.011G030300 10.0kb downstream 10.0kb downstream 14988 true Chr11: 2736072-2751059 Phaseolus vulgaris
Phvul.011G030300 10.0kb downstream 10.0kb downstream 10000 false Chr11: 2741060-2751059 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310639 5265 Fabidae View MSA
124064382 5270 Rosid View MSA
123742175 5271 Pentapetalae View MSA
122791560 5272 Eudicot View MSA
122045334 5273 Angiosperm View MSA
121349707 5274 Embryophyte View MSA
123428473 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0418275 0.0 0.184892 Low Low
cufflinks 0.0897633 0.0 0.369734 Low  
cufflinks 0.0238626 0.0 0.111455 Low Low
cufflinks 0.285727 0.0 1.07672 Low  
cufflinks 0.264743 0.0 1.00606 Low  
cufflinks 2.04694 0.0 6.26478    
cufflinks 1.07441 0.0 3.53358    
cufflinks 0.400483 0.0 1.45969 Low  
cufflinks 10.3389 0.0 27.1584   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.71341 0.0 2.47343    

0 Strain