Gene : Phvul.011G155200 P. vulgaris v2.1
Defline:  (1 of 1) K02730 - 20S proteasome subunit alpha 1 (PSMA6) Genomic Order:  1531
Name:  ? Phvul.011G155200 Secondary Identifier:  ? PAC:37154850
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.011G155200 0.5kb upstream 0.5kb upstream 9169 true Chr11: 44342969-44352137 Phaseolus vulgaris
Phvul.011G155200 0.5kb upstream 0.5kb upstream 500 false Chr11: 44351638-44352137 Phaseolus vulgaris
Phvul.011G155200 0.5kb downstream 0.5kb downstream 9169 true Chr11: 44342469-44351637 Phaseolus vulgaris
Phvul.011G155200 0.5kb downstream 0.5kb downstream 500 false Chr11: 44342469-44342968 Phaseolus vulgaris
Phvul.011G155200 1.0kb upstream 1.0kb upstream 9669 true Chr11: 44342969-44352637 Phaseolus vulgaris
Phvul.011G155200 1.0kb upstream 1.0kb upstream 1000 false Chr11: 44351638-44352637 Phaseolus vulgaris
Phvul.011G155200 1.0kb downstream 1.0kb downstream 9669 true Chr11: 44341969-44351637 Phaseolus vulgaris
Phvul.011G155200 1.0kb downstream 1.0kb downstream 1000 false Chr11: 44341969-44342968 Phaseolus vulgaris
Phvul.011G155200 2.0kb upstream 2.0kb upstream 10669 true Chr11: 44342969-44353637 Phaseolus vulgaris
Phvul.011G155200 2.0kb upstream 2.0kb upstream 2000 false Chr11: 44351638-44353637 Phaseolus vulgaris
Phvul.011G155200 2.0kb downstream 2.0kb downstream 10669 true Chr11: 44340969-44351637 Phaseolus vulgaris
Phvul.011G155200 2.0kb downstream 2.0kb downstream 2000 false Chr11: 44340969-44342968 Phaseolus vulgaris
Phvul.011G155200 5.0kb upstream 5.0kb upstream 13669 true Chr11: 44342969-44356637 Phaseolus vulgaris
Phvul.011G155200 5.0kb upstream 5.0kb upstream 5000 false Chr11: 44351638-44356637 Phaseolus vulgaris
Phvul.011G155200 5.0kb downstream 5.0kb downstream 13669 true Chr11: 44337969-44351637 Phaseolus vulgaris
Phvul.011G155200 5.0kb downstream 5.0kb downstream 5000 false Chr11: 44337969-44342968 Phaseolus vulgaris
Phvul.011G155200 10.0kb upstream 10.0kb upstream 18669 true Chr11: 44342969-44361637 Phaseolus vulgaris
Phvul.011G155200 10.0kb upstream 10.0kb upstream 10000 false Chr11: 44351638-44361637 Phaseolus vulgaris
Phvul.011G155200 10.0kb downstream 10.0kb downstream 18669 true Chr11: 44332969-44351637 Phaseolus vulgaris
Phvul.011G155200 10.0kb downstream 10.0kb downstream 10000 false Chr11: 44332969-44342968 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041382 5273 Angiosperm View MSA
122313818 5265 Fabidae View MSA
124061285 5270 Rosid View MSA
123742081 5271 Pentapetalae View MSA
122789367 5272 Eudicot View MSA
121345997 5274 Embryophyte View MSA
123424581 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 78.7601 0.0 268.999 High  
cufflinks 88.4122 0.0 318.394 High  
cufflinks 47.7192 0.0 159.05 High Low
cufflinks 119.2 0.0 437.985 High High
cufflinks 64.6355 0.0 216.518 High  
cufflinks 63.0127 0.0 210.847 High  
cufflinks 67.6537 0.0 227.749 High  
cufflinks 63.7217 0.0 214.877 High  
cufflinks 83.6847 0.0 287.383 High  
cufflinks 59.9157 0.0 203.632 High  
cufflinks 82.4941 0.0 283.529 High  

0 Strain