Gene : Phvul.011G157500 P. vulgaris v2.1
Defline:  (1 of 1) PTHR11751:SF387 - AMINOTRANSFERASE TAT2-RELATED Genomic Order:  1553
Name:  ? Phvul.011G157500 Secondary Identifier:  ? PAC:37155024
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.011G157500 0.5kb upstream 0.5kb upstream 5266 true Chr11: 44904415-44909680 Phaseolus vulgaris
Phvul.011G157500 0.5kb upstream 0.5kb upstream 500 false Chr11: 44904415-44904914 Phaseolus vulgaris
Phvul.011G157500 0.5kb downstream 0.5kb downstream 5266 true Chr11: 44904915-44910180 Phaseolus vulgaris
Phvul.011G157500 0.5kb downstream 0.5kb downstream 500 false Chr11: 44909681-44910180 Phaseolus vulgaris
Phvul.011G157500 1.0kb upstream 1.0kb upstream 5766 true Chr11: 44903915-44909680 Phaseolus vulgaris
Phvul.011G157500 1.0kb upstream 1.0kb upstream 1000 false Chr11: 44903915-44904914 Phaseolus vulgaris
Phvul.011G157500 1.0kb downstream 1.0kb downstream 5766 true Chr11: 44904915-44910680 Phaseolus vulgaris
Phvul.011G157500 1.0kb downstream 1.0kb downstream 1000 false Chr11: 44909681-44910680 Phaseolus vulgaris
Phvul.011G157500 2.0kb upstream 2.0kb upstream 6766 true Chr11: 44902915-44909680 Phaseolus vulgaris
Phvul.011G157500 2.0kb upstream 2.0kb upstream 2000 false Chr11: 44902915-44904914 Phaseolus vulgaris
Phvul.011G157500 2.0kb downstream 2.0kb downstream 6766 true Chr11: 44904915-44911680 Phaseolus vulgaris
Phvul.011G157500 2.0kb downstream 2.0kb downstream 2000 false Chr11: 44909681-44911680 Phaseolus vulgaris
Phvul.011G157500 5.0kb upstream 5.0kb upstream 9766 true Chr11: 44899915-44909680 Phaseolus vulgaris
Phvul.011G157500 5.0kb upstream 5.0kb upstream 5000 false Chr11: 44899915-44904914 Phaseolus vulgaris
Phvul.011G157500 5.0kb downstream 5.0kb downstream 9766 true Chr11: 44904915-44914680 Phaseolus vulgaris
Phvul.011G157500 5.0kb downstream 5.0kb downstream 5000 false Chr11: 44909681-44914680 Phaseolus vulgaris
Phvul.011G157500 10.0kb upstream 10.0kb upstream 14766 true Chr11: 44894915-44909680 Phaseolus vulgaris
Phvul.011G157500 10.0kb upstream 10.0kb upstream 10000 false Chr11: 44894915-44904914 Phaseolus vulgaris
Phvul.011G157500 10.0kb downstream 10.0kb downstream 14766 true Chr11: 44904915-44919680 Phaseolus vulgaris
Phvul.011G157500 10.0kb downstream 10.0kb downstream 10000 false Chr11: 44909681-44919680 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302326 5265 Fabidae View MSA
124063132 5270 Rosid View MSA
123742596 5271 Pentapetalae View MSA
122795476 5272 Eudicot View MSA
122051547 5273 Angiosperm View MSA
121351636 5274 Embryophyte View MSA
123426927 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 75.197 0.0 258.915 High High
cufflinks 14.4959 0.0 43.153    
cufflinks 7.37575 0.0 28.8446    
cufflinks 14.1256 0.0 42.6639    
cufflinks 1.79689 0.0 6.87551    
cufflinks 8.66332 0.0 28.0593    
cufflinks 0.272592 0.0 1.08009 Low Low
cufflinks 1.07421 0.0 4.61434    
cufflinks 0.950929 0.0 4.21933    
cufflinks 5.58491 0.0 23.7144    
cufflinks 3.67819 0.0 12.0135    

0 Strain