Gene : Phvul.011G162600 P. vulgaris v2.1
Defline:  (1 of 2) PTHR31969:SF9 - GEM-LIKE PROTEIN 2 Genomic Order:  1604
Name:  ? Phvul.011G162600 Secondary Identifier:  ? PAC:37155909
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.011G162600 0.5kb upstream 0.5kb upstream 9984 true Chr11: 46074430-46084413 Phaseolus vulgaris
Phvul.011G162600 0.5kb upstream 0.5kb upstream 500 false Chr11: 46083914-46084413 Phaseolus vulgaris
Phvul.011G162600 0.5kb downstream 0.5kb downstream 9984 true Chr11: 46073930-46083913 Phaseolus vulgaris
Phvul.011G162600 0.5kb downstream 0.5kb downstream 500 false Chr11: 46073930-46074429 Phaseolus vulgaris
Phvul.011G162600 1.0kb upstream 1.0kb upstream 10484 true Chr11: 46074430-46084913 Phaseolus vulgaris
Phvul.011G162600 1.0kb upstream 1.0kb upstream 1000 false Chr11: 46083914-46084913 Phaseolus vulgaris
Phvul.011G162600 1.0kb downstream 1.0kb downstream 10484 true Chr11: 46073430-46083913 Phaseolus vulgaris
Phvul.011G162600 1.0kb downstream 1.0kb downstream 1000 false Chr11: 46073430-46074429 Phaseolus vulgaris
Phvul.011G162600 2.0kb upstream 2.0kb upstream 11484 true Chr11: 46074430-46085913 Phaseolus vulgaris
Phvul.011G162600 2.0kb upstream 2.0kb upstream 2000 false Chr11: 46083914-46085913 Phaseolus vulgaris
Phvul.011G162600 2.0kb downstream 2.0kb downstream 11484 true Chr11: 46072430-46083913 Phaseolus vulgaris
Phvul.011G162600 2.0kb downstream 2.0kb downstream 2000 false Chr11: 46072430-46074429 Phaseolus vulgaris
Phvul.011G162600 5.0kb upstream 5.0kb upstream 14484 true Chr11: 46074430-46088913 Phaseolus vulgaris
Phvul.011G162600 5.0kb upstream 5.0kb upstream 5000 false Chr11: 46083914-46088913 Phaseolus vulgaris
Phvul.011G162600 5.0kb downstream 5.0kb downstream 14484 true Chr11: 46069430-46083913 Phaseolus vulgaris
Phvul.011G162600 5.0kb downstream 5.0kb downstream 5000 false Chr11: 46069430-46074429 Phaseolus vulgaris
Phvul.011G162600 10.0kb upstream 10.0kb upstream 19484 true Chr11: 46074430-46093913 Phaseolus vulgaris
Phvul.011G162600 10.0kb upstream 10.0kb upstream 10000 false Chr11: 46083914-46093913 Phaseolus vulgaris
Phvul.011G162600 10.0kb downstream 10.0kb downstream 19484 true Chr11: 46064430-46083913 Phaseolus vulgaris
Phvul.011G162600 10.0kb downstream 10.0kb downstream 10000 false Chr11: 46064430-46074429 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306171 5265 Fabidae View MSA
124072428 5270 Rosid View MSA
123752568 5271 Pentapetalae View MSA
122797412 5272 Eudicot View MSA
122050342 5273 Angiosperm View MSA
121350470 5274 Embryophyte View MSA
123381748 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.1553 0.0 24.5111    
cufflinks 1.5285 0.0 8.9139    
cufflinks 3.31165 0.0 21.9341    
cufflinks 2.333 0.0 19.7421    
cufflinks 3.91462 0.0 18.0939    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 2.11006 0.0 15.2653    
cufflinks 0.720884 0.0 4.92161   Low
cufflinks 9.9045 0.0 46.9675   High
cufflinks 8.11943 0.0 41.4217   High
cufflinks 2.57292 0.0 13.3724    

0 Strain