Gene : Phvul.011G163000 P. vulgaris v2.1
Defline:  (1 of 11) KOG3399 - Predicted Yippee-type zinc-binding protein Genomic Order:  1608
Name:  ? Phvul.011G163000 Secondary Identifier:  ? PAC:37155678
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.011G163000 0.5kb upstream 0.5kb upstream 11067 true Chr11: 46165526-46176592 Phaseolus vulgaris
Phvul.011G163000 0.5kb upstream 0.5kb upstream 500 false Chr11: 46176093-46176592 Phaseolus vulgaris
Phvul.011G163000 0.5kb downstream 0.5kb downstream 11067 true Chr11: 46165026-46176092 Phaseolus vulgaris
Phvul.011G163000 0.5kb downstream 0.5kb downstream 500 false Chr11: 46165026-46165525 Phaseolus vulgaris
Phvul.011G163000 1.0kb upstream 1.0kb upstream 11567 true Chr11: 46165526-46177092 Phaseolus vulgaris
Phvul.011G163000 1.0kb upstream 1.0kb upstream 1000 false Chr11: 46176093-46177092 Phaseolus vulgaris
Phvul.011G163000 1.0kb downstream 1.0kb downstream 11567 true Chr11: 46164526-46176092 Phaseolus vulgaris
Phvul.011G163000 1.0kb downstream 1.0kb downstream 1000 false Chr11: 46164526-46165525 Phaseolus vulgaris
Phvul.011G163000 2.0kb upstream 2.0kb upstream 12567 true Chr11: 46165526-46178092 Phaseolus vulgaris
Phvul.011G163000 2.0kb upstream 2.0kb upstream 2000 false Chr11: 46176093-46178092 Phaseolus vulgaris
Phvul.011G163000 2.0kb downstream 2.0kb downstream 12567 true Chr11: 46163526-46176092 Phaseolus vulgaris
Phvul.011G163000 2.0kb downstream 2.0kb downstream 2000 false Chr11: 46163526-46165525 Phaseolus vulgaris
Phvul.011G163000 5.0kb upstream 5.0kb upstream 15567 true Chr11: 46165526-46181092 Phaseolus vulgaris
Phvul.011G163000 5.0kb upstream 5.0kb upstream 5000 false Chr11: 46176093-46181092 Phaseolus vulgaris
Phvul.011G163000 5.0kb downstream 5.0kb downstream 15567 true Chr11: 46160526-46176092 Phaseolus vulgaris
Phvul.011G163000 5.0kb downstream 5.0kb downstream 5000 false Chr11: 46160526-46165525 Phaseolus vulgaris
Phvul.011G163000 10.0kb upstream 10.0kb upstream 20567 true Chr11: 46165526-46186092 Phaseolus vulgaris
Phvul.011G163000 10.0kb upstream 10.0kb upstream 10000 false Chr11: 46176093-46186092 Phaseolus vulgaris
Phvul.011G163000 10.0kb downstream 10.0kb downstream 20567 true Chr11: 46155526-46176092 Phaseolus vulgaris
Phvul.011G163000 10.0kb downstream 10.0kb downstream 10000 false Chr11: 46155526-46165525 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041250 5273 Angiosperm View MSA
122296903 5265 Fabidae View MSA
124066251 5270 Rosid View MSA
123749273 5271 Pentapetalae View MSA
122792066 5272 Eudicot View MSA
123428914 5275 Viridiplantae View MSA
121350900 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 38.5022 0.0 100.912 High  
cufflinks 32.6121 0.0 86.4165    
cufflinks 28.8037 0.0 76.783    
cufflinks 58.2017 0.0 150.835 High High
cufflinks 23.3664 0.0 64.0326    
cufflinks 22.2371 0.0 60.6556    
cufflinks 19.5321 0.0 53.9531   Low
cufflinks 25.5623 0.0 68.7394    
cufflinks 17.9173 0.0 50.0521   Low
cufflinks 32.0896 0.0 85.2038    
cufflinks 32.688 0.0 86.9243    

0 Strain