Gene : Phvul.011G162000 P. vulgaris v2.1
Defline:  (1 of 2) K08956 - AFG3 family protein [EC:3.4.24.-] (AFG3) Genomic Order:  1599
Name:  ? Phvul.011G162000 Secondary Identifier:  ? PAC:37154692
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.011G162000 0.5kb upstream 0.5kb upstream 6669 true Chr11: 45975408-45982076 Phaseolus vulgaris
Phvul.011G162000 0.5kb upstream 0.5kb upstream 500 false Chr11: 45975408-45975907 Phaseolus vulgaris
Phvul.011G162000 0.5kb downstream 0.5kb downstream 6669 true Chr11: 45975908-45982576 Phaseolus vulgaris
Phvul.011G162000 0.5kb downstream 0.5kb downstream 500 false Chr11: 45982077-45982576 Phaseolus vulgaris
Phvul.011G162000 1.0kb upstream 1.0kb upstream 7169 true Chr11: 45974908-45982076 Phaseolus vulgaris
Phvul.011G162000 1.0kb upstream 1.0kb upstream 1000 false Chr11: 45974908-45975907 Phaseolus vulgaris
Phvul.011G162000 1.0kb downstream 1.0kb downstream 7169 true Chr11: 45975908-45983076 Phaseolus vulgaris
Phvul.011G162000 1.0kb downstream 1.0kb downstream 1000 false Chr11: 45982077-45983076 Phaseolus vulgaris
Phvul.011G162000 2.0kb upstream 2.0kb upstream 8169 true Chr11: 45973908-45982076 Phaseolus vulgaris
Phvul.011G162000 2.0kb upstream 2.0kb upstream 2000 false Chr11: 45973908-45975907 Phaseolus vulgaris
Phvul.011G162000 2.0kb downstream 2.0kb downstream 8169 true Chr11: 45975908-45984076 Phaseolus vulgaris
Phvul.011G162000 2.0kb downstream 2.0kb downstream 2000 false Chr11: 45982077-45984076 Phaseolus vulgaris
Phvul.011G162000 5.0kb upstream 5.0kb upstream 11169 true Chr11: 45970908-45982076 Phaseolus vulgaris
Phvul.011G162000 5.0kb upstream 5.0kb upstream 5000 false Chr11: 45970908-45975907 Phaseolus vulgaris
Phvul.011G162000 5.0kb downstream 5.0kb downstream 11169 true Chr11: 45975908-45987076 Phaseolus vulgaris
Phvul.011G162000 5.0kb downstream 5.0kb downstream 5000 false Chr11: 45982077-45987076 Phaseolus vulgaris
Phvul.011G162000 10.0kb upstream 10.0kb upstream 16169 true Chr11: 45965908-45982076 Phaseolus vulgaris
Phvul.011G162000 10.0kb upstream 10.0kb upstream 10000 false Chr11: 45965908-45975907 Phaseolus vulgaris
Phvul.011G162000 10.0kb downstream 10.0kb downstream 16169 true Chr11: 45975908-45992076 Phaseolus vulgaris
Phvul.011G162000 10.0kb downstream 10.0kb downstream 10000 false Chr11: 45982077-45992076 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306311 5265 Fabidae View MSA
124064309 5270 Rosid View MSA
123736600 5271 Pentapetalae View MSA
122793293 5272 Eudicot View MSA
122047667 5273 Angiosperm View MSA
121345143 5274 Embryophyte View MSA
123426820 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.5633 0.0 40.2302    
cufflinks 14.5957 0.0 37.7293    
cufflinks 13.9554 0.0 36.0804    
cufflinks 9.63906 0.0 25.2726   Low
cufflinks 11.5742 0.0 30.064   Low
cufflinks 15.7966 0.0 40.8365    
cufflinks 18.1446 0.0 46.9823    
cufflinks 25.2745 0.0 66.2867   High
cufflinks 21.5419 0.0 55.9882   High
cufflinks 16.8385 0.0 43.5403    
cufflinks 12.8716 0.0 33.3331    

0 Strain