Gene : Phvul.011G144150 P. vulgaris v2.1
Defline:  (1 of 11) KOG2722 - Predicted membrane protein Genomic Order:  1448
Name:  ? Phvul.011G144150 Secondary Identifier:  ? PAC:37155725
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.011G144150 0.5kb upstream 0.5kb upstream 3393 true Chr11: 39174970-39178362 Phaseolus vulgaris
Phvul.011G144150 0.5kb upstream 0.5kb upstream 500 false Chr11: 39177863-39178362 Phaseolus vulgaris
Phvul.011G144150 0.5kb downstream 0.5kb downstream 3393 true Chr11: 39174470-39177862 Phaseolus vulgaris
Phvul.011G144150 0.5kb downstream 0.5kb downstream 500 false Chr11: 39174470-39174969 Phaseolus vulgaris
Phvul.011G144150 1.0kb upstream 1.0kb upstream 3893 true Chr11: 39174970-39178862 Phaseolus vulgaris
Phvul.011G144150 1.0kb upstream 1.0kb upstream 1000 false Chr11: 39177863-39178862 Phaseolus vulgaris
Phvul.011G144150 1.0kb downstream 1.0kb downstream 3893 true Chr11: 39173970-39177862 Phaseolus vulgaris
Phvul.011G144150 1.0kb downstream 1.0kb downstream 1000 false Chr11: 39173970-39174969 Phaseolus vulgaris
Phvul.011G144150 2.0kb upstream 2.0kb upstream 4893 true Chr11: 39174970-39179862 Phaseolus vulgaris
Phvul.011G144150 2.0kb upstream 2.0kb upstream 2000 false Chr11: 39177863-39179862 Phaseolus vulgaris
Phvul.011G144150 2.0kb downstream 2.0kb downstream 4893 true Chr11: 39172970-39177862 Phaseolus vulgaris
Phvul.011G144150 2.0kb downstream 2.0kb downstream 2000 false Chr11: 39172970-39174969 Phaseolus vulgaris
Phvul.011G144150 5.0kb upstream 5.0kb upstream 7893 true Chr11: 39174970-39182862 Phaseolus vulgaris
Phvul.011G144150 5.0kb upstream 5.0kb upstream 5000 false Chr11: 39177863-39182862 Phaseolus vulgaris
Phvul.011G144150 5.0kb downstream 5.0kb downstream 7893 true Chr11: 39169970-39177862 Phaseolus vulgaris
Phvul.011G144150 5.0kb downstream 5.0kb downstream 5000 false Chr11: 39169970-39174969 Phaseolus vulgaris
Phvul.011G144150 10.0kb upstream 10.0kb upstream 12893 true Chr11: 39174970-39187862 Phaseolus vulgaris
Phvul.011G144150 10.0kb upstream 10.0kb upstream 10000 false Chr11: 39177863-39187862 Phaseolus vulgaris
Phvul.011G144150 10.0kb downstream 10.0kb downstream 12893 true Chr11: 39164970-39177862 Phaseolus vulgaris
Phvul.011G144150 10.0kb downstream 10.0kb downstream 10000 false Chr11: 39164970-39174969 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026446 5273 Angiosperm View MSA
122255132 5265 Fabidae View MSA
124070797 5270 Rosid View MSA
123751038 5271 Pentapetalae View MSA
122794652 5272 Eudicot View MSA
123429004 5275 Viridiplantae View MSA
121349316 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0152618 0.0 0.081969 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0261255 0.0 0.131519 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.682816 0.0 2.56714    
cufflinks 0.019772 0.0 0.103047 Low Low
cufflinks 0.428348 0.0 1.66714 Low  
cufflinks 2.83305 0.0 9.12921   High
cufflinks 0.254641 0.0 1.03358 Low  
cufflinks 0.176009 0.0 0.733062 Low  
cufflinks 0.513117 0.0 1.97048 Low  

0 Strain