Gene : Phvul.011G145900 P. vulgaris v2.1
Defline:  (1 of 1) PTHR10353:SF46 - BETA-GLUCOSIDASE 41-RELATED Genomic Order:  1425
Name:  ? Phvul.011G145900 Secondary Identifier:  ? PAC:37156624
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Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-3121 Phaseolus vulgaris pathologic  
Pvulgaris PWY-5176 Phaseolus vulgaris pathologic  
Pvulgaris PWY-6002 Phaseolus vulgaris pathologic  
Pvulgaris PWY-7089 Phaseolus vulgaris pathologic  
Pvulgaris PWY-7091 Phaseolus vulgaris pathologic  
Pvulgaris PWY-7092 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.011G145900 0.5kb upstream 0.5kb upstream 5628 true Chr11: 37758561-37764188 Phaseolus vulgaris
Phvul.011G145900 0.5kb upstream 0.5kb upstream 500 false Chr11: 37758561-37759060 Phaseolus vulgaris
Phvul.011G145900 0.5kb downstream 0.5kb downstream 5628 true Chr11: 37759061-37764688 Phaseolus vulgaris
Phvul.011G145900 0.5kb downstream 0.5kb downstream 500 false Chr11: 37764189-37764688 Phaseolus vulgaris
Phvul.011G145900 1.0kb upstream 1.0kb upstream 6128 true Chr11: 37758061-37764188 Phaseolus vulgaris
Phvul.011G145900 1.0kb upstream 1.0kb upstream 1000 false Chr11: 37758061-37759060 Phaseolus vulgaris
Phvul.011G145900 1.0kb downstream 1.0kb downstream 6128 true Chr11: 37759061-37765188 Phaseolus vulgaris
Phvul.011G145900 1.0kb downstream 1.0kb downstream 1000 false Chr11: 37764189-37765188 Phaseolus vulgaris
Phvul.011G145900 2.0kb upstream 2.0kb upstream 7128 true Chr11: 37757061-37764188 Phaseolus vulgaris
Phvul.011G145900 2.0kb upstream 2.0kb upstream 2000 false Chr11: 37757061-37759060 Phaseolus vulgaris
Phvul.011G145900 2.0kb downstream 2.0kb downstream 7128 true Chr11: 37759061-37766188 Phaseolus vulgaris
Phvul.011G145900 2.0kb downstream 2.0kb downstream 2000 false Chr11: 37764189-37766188 Phaseolus vulgaris
Phvul.011G145900 5.0kb upstream 5.0kb upstream 10128 true Chr11: 37754061-37764188 Phaseolus vulgaris
Phvul.011G145900 5.0kb upstream 5.0kb upstream 5000 false Chr11: 37754061-37759060 Phaseolus vulgaris
Phvul.011G145900 5.0kb downstream 5.0kb downstream 10128 true Chr11: 37759061-37769188 Phaseolus vulgaris
Phvul.011G145900 5.0kb downstream 5.0kb downstream 5000 false Chr11: 37764189-37769188 Phaseolus vulgaris
Phvul.011G145900 10.0kb upstream 10.0kb upstream 15128 true Chr11: 37749061-37764188 Phaseolus vulgaris
Phvul.011G145900 10.0kb upstream 10.0kb upstream 10000 false Chr11: 37749061-37759060 Phaseolus vulgaris
Phvul.011G145900 10.0kb downstream 10.0kb downstream 15128 true Chr11: 37759061-37774188 Phaseolus vulgaris
Phvul.011G145900 10.0kb downstream 10.0kb downstream 10000 false Chr11: 37764189-37774188 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301112 5265 Fabidae View MSA
124063418 5270 Rosid View MSA
123738242 5271 Pentapetalae View MSA
122788523 5272 Eudicot View MSA
122050283 5273 Angiosperm View MSA
121350182 5274 Embryophyte View MSA
123428830 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 39.6424 0.0 104.165 High High
cufflinks 9.20538 0.0 24.6962    
cufflinks 0.482772 0.0 1.75203 Low  
cufflinks 1.10263 0.0 3.72724    
cufflinks 0.781161 0.0 2.75004    
cufflinks 0.230448 0.0 0.893148 Low Low
cufflinks 0.558581 0.0 2.01478 Low  
cufflinks 0.244666 0.0 0.940444 Low Low
cufflinks 1.24643 0.0 4.13529    
cufflinks 29.9109 0.0 77.547   High
cufflinks 0.584789 0.0 2.11343    

0 Strain