Gene : Phvul.011G145600 P. vulgaris v2.1
Genomic Order:  1422 Name:  ? Phvul.011G145600
Secondary Identifier:  ? PAC:37154767
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.011G145600 0.5kb upstream 0.5kb upstream 2376 true Chr11: 37634356-37636731 Phaseolus vulgaris
Phvul.011G145600 0.5kb upstream 0.5kb upstream 500 false Chr11: 37636232-37636731 Phaseolus vulgaris
Phvul.011G145600 0.5kb downstream 0.5kb downstream 2376 true Chr11: 37633856-37636231 Phaseolus vulgaris
Phvul.011G145600 0.5kb downstream 0.5kb downstream 500 false Chr11: 37633856-37634355 Phaseolus vulgaris
Phvul.011G145600 1.0kb upstream 1.0kb upstream 2876 true Chr11: 37634356-37637231 Phaseolus vulgaris
Phvul.011G145600 1.0kb upstream 1.0kb upstream 1000 false Chr11: 37636232-37637231 Phaseolus vulgaris
Phvul.011G145600 1.0kb downstream 1.0kb downstream 2876 true Chr11: 37633356-37636231 Phaseolus vulgaris
Phvul.011G145600 1.0kb downstream 1.0kb downstream 1000 false Chr11: 37633356-37634355 Phaseolus vulgaris
Phvul.011G145600 2.0kb upstream 2.0kb upstream 3876 true Chr11: 37634356-37638231 Phaseolus vulgaris
Phvul.011G145600 2.0kb upstream 2.0kb upstream 2000 false Chr11: 37636232-37638231 Phaseolus vulgaris
Phvul.011G145600 2.0kb downstream 2.0kb downstream 3876 true Chr11: 37632356-37636231 Phaseolus vulgaris
Phvul.011G145600 2.0kb downstream 2.0kb downstream 2000 false Chr11: 37632356-37634355 Phaseolus vulgaris
Phvul.011G145600 5.0kb upstream 5.0kb upstream 6876 true Chr11: 37634356-37641231 Phaseolus vulgaris
Phvul.011G145600 5.0kb upstream 5.0kb upstream 5000 false Chr11: 37636232-37641231 Phaseolus vulgaris
Phvul.011G145600 5.0kb downstream 5.0kb downstream 6876 true Chr11: 37629356-37636231 Phaseolus vulgaris
Phvul.011G145600 5.0kb downstream 5.0kb downstream 5000 false Chr11: 37629356-37634355 Phaseolus vulgaris
Phvul.011G145600 10.0kb upstream 10.0kb upstream 11876 true Chr11: 37634356-37646231 Phaseolus vulgaris
Phvul.011G145600 10.0kb upstream 10.0kb upstream 10000 false Chr11: 37636232-37646231 Phaseolus vulgaris
Phvul.011G145600 10.0kb downstream 10.0kb downstream 11876 true Chr11: 37624356-37636231 Phaseolus vulgaris
Phvul.011G145600 10.0kb downstream 10.0kb downstream 10000 false Chr11: 37624356-37634355 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027930 5273 Angiosperm View MSA
122302906 5265 Fabidae View MSA
124068301 5270 Rosid View MSA
123752327 5271 Pentapetalae View MSA
122796445 5272 Eudicot View MSA
121297501 5274 Embryophyte View MSA
123335552 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 92.6111 0.0 241.054 High High
cufflinks 10.0894 0.0 29.7873    
cufflinks 65.2661 0.0 168.761 High High
cufflinks 13.5009 0.0 38.1365    
cufflinks 7.52821 0.0 22.6924    
cufflinks 9.62357 0.0 28.6078    
cufflinks 7.70391 0.0 23.1795    
cufflinks 5.49929 0.0 17.3677   Low
cufflinks 15.8898 0.0 44.3882    
cufflinks 49.0112 0.0 127.129 High High
cufflinks 5.16106 0.0 16.2424   Low

0 Strain