Gene : Phvul.011G153700 P. vulgaris v2.1
Defline:  (1 of 1) PTHR31656:SF5 - LATE EMBRYOGENESIS ABUNDANT-RELATED PROTEIN Genomic Order:  1517
Name:  ? Phvul.011G153700 Secondary Identifier:  ? PAC:37156759
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.011G153700 0.5kb upstream 0.5kb upstream 1920 true Chr11: 44077659-44079578 Phaseolus vulgaris
Phvul.011G153700 0.5kb upstream 0.5kb upstream 500 false Chr11: 44077659-44078158 Phaseolus vulgaris
Phvul.011G153700 0.5kb downstream 0.5kb downstream 1920 true Chr11: 44078159-44080078 Phaseolus vulgaris
Phvul.011G153700 0.5kb downstream 0.5kb downstream 500 false Chr11: 44079579-44080078 Phaseolus vulgaris
Phvul.011G153700 1.0kb upstream 1.0kb upstream 2420 true Chr11: 44077159-44079578 Phaseolus vulgaris
Phvul.011G153700 1.0kb upstream 1.0kb upstream 1000 false Chr11: 44077159-44078158 Phaseolus vulgaris
Phvul.011G153700 1.0kb downstream 1.0kb downstream 2420 true Chr11: 44078159-44080578 Phaseolus vulgaris
Phvul.011G153700 1.0kb downstream 1.0kb downstream 1000 false Chr11: 44079579-44080578 Phaseolus vulgaris
Phvul.011G153700 2.0kb upstream 2.0kb upstream 3420 true Chr11: 44076159-44079578 Phaseolus vulgaris
Phvul.011G153700 2.0kb upstream 2.0kb upstream 2000 false Chr11: 44076159-44078158 Phaseolus vulgaris
Phvul.011G153700 2.0kb downstream 2.0kb downstream 3420 true Chr11: 44078159-44081578 Phaseolus vulgaris
Phvul.011G153700 2.0kb downstream 2.0kb downstream 2000 false Chr11: 44079579-44081578 Phaseolus vulgaris
Phvul.011G153700 5.0kb upstream 5.0kb upstream 6420 true Chr11: 44073159-44079578 Phaseolus vulgaris
Phvul.011G153700 5.0kb upstream 5.0kb upstream 5000 false Chr11: 44073159-44078158 Phaseolus vulgaris
Phvul.011G153700 5.0kb downstream 5.0kb downstream 6420 true Chr11: 44078159-44084578 Phaseolus vulgaris
Phvul.011G153700 5.0kb downstream 5.0kb downstream 5000 false Chr11: 44079579-44084578 Phaseolus vulgaris
Phvul.011G153700 10.0kb upstream 10.0kb upstream 11420 true Chr11: 44068159-44079578 Phaseolus vulgaris
Phvul.011G153700 10.0kb upstream 10.0kb upstream 10000 false Chr11: 44068159-44078158 Phaseolus vulgaris
Phvul.011G153700 10.0kb downstream 10.0kb downstream 11420 true Chr11: 44078159-44089578 Phaseolus vulgaris
Phvul.011G153700 10.0kb downstream 10.0kb downstream 10000 false Chr11: 44079579-44089578 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311694 5265 Fabidae View MSA
124073376 5270 Rosid View MSA
123752203 5271 Pentapetalae View MSA
122797654 5272 Eudicot View MSA
122050447 5273 Angiosperm View MSA
121349873 5274 Embryophyte View MSA
123381481 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.10635 0.0 0.457306 Low Low
cufflinks 0.816545 0.0 2.96723    
cufflinks 2.18978 0.0 7.14184    
cufflinks 0.983466 0.0 3.5171    
cufflinks 1.76516 0.0 5.92705    
cufflinks 1.16045 0.0 4.07728    
cufflinks 2.80482 0.0 8.89486    
cufflinks 0.661199 0.0 2.44173    
cufflinks 19.1195 0.0 50.3107   High
cufflinks 0.45364 0.0 1.7362    
cufflinks 1.61137 0.0 5.47498    

0 Strain