Gene : Phvul.011G134300 P. vulgaris v2.1
Defline:  (1 of 1) PTHR12565//PTHR12565:SF82 - STEROL REGULATORY ELEMENT-BINDING PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  1317
Name:  ? Phvul.011G134300 Secondary Identifier:  ? PAC:37155294
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.011G134300 0.5kb upstream 0.5kb upstream 2391 true Chr11: 32621899-32624289 Phaseolus vulgaris
Phvul.011G134300 0.5kb upstream 0.5kb upstream 500 false Chr11: 32623790-32624289 Phaseolus vulgaris
Phvul.011G134300 0.5kb downstream 0.5kb downstream 2391 true Chr11: 32621399-32623789 Phaseolus vulgaris
Phvul.011G134300 0.5kb downstream 0.5kb downstream 500 false Chr11: 32621399-32621898 Phaseolus vulgaris
Phvul.011G134300 1.0kb upstream 1.0kb upstream 2891 true Chr11: 32621899-32624789 Phaseolus vulgaris
Phvul.011G134300 1.0kb upstream 1.0kb upstream 1000 false Chr11: 32623790-32624789 Phaseolus vulgaris
Phvul.011G134300 1.0kb downstream 1.0kb downstream 2891 true Chr11: 32620899-32623789 Phaseolus vulgaris
Phvul.011G134300 1.0kb downstream 1.0kb downstream 1000 false Chr11: 32620899-32621898 Phaseolus vulgaris
Phvul.011G134300 2.0kb upstream 2.0kb upstream 3891 true Chr11: 32621899-32625789 Phaseolus vulgaris
Phvul.011G134300 2.0kb upstream 2.0kb upstream 2000 false Chr11: 32623790-32625789 Phaseolus vulgaris
Phvul.011G134300 2.0kb downstream 2.0kb downstream 3891 true Chr11: 32619899-32623789 Phaseolus vulgaris
Phvul.011G134300 2.0kb downstream 2.0kb downstream 2000 false Chr11: 32619899-32621898 Phaseolus vulgaris
Phvul.011G134300 5.0kb upstream 5.0kb upstream 6891 true Chr11: 32621899-32628789 Phaseolus vulgaris
Phvul.011G134300 5.0kb upstream 5.0kb upstream 5000 false Chr11: 32623790-32628789 Phaseolus vulgaris
Phvul.011G134300 5.0kb downstream 5.0kb downstream 6891 true Chr11: 32616899-32623789 Phaseolus vulgaris
Phvul.011G134300 5.0kb downstream 5.0kb downstream 5000 false Chr11: 32616899-32621898 Phaseolus vulgaris
Phvul.011G134300 10.0kb upstream 10.0kb upstream 11891 true Chr11: 32621899-32633789 Phaseolus vulgaris
Phvul.011G134300 10.0kb upstream 10.0kb upstream 10000 false Chr11: 32623790-32633789 Phaseolus vulgaris
Phvul.011G134300 10.0kb downstream 10.0kb downstream 11891 true Chr11: 32611899-32623789 Phaseolus vulgaris
Phvul.011G134300 10.0kb downstream 10.0kb downstream 10000 false Chr11: 32611899-32621898 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297355 5265 Fabidae View MSA
124070822 5270 Rosid View MSA
123748515 5271 Pentapetalae View MSA
122793981 5272 Eudicot View MSA
122048947 5273 Angiosperm View MSA
121351451 5274 Embryophyte View MSA
123428440 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.228587 0.0 0.917631 Low Low
cufflinks 0.358551 0.0 1.39076 Low  
cufflinks 0.629883 0.0 2.32302    
cufflinks 4.09607 0.0 12.6383    
cufflinks 1.07288 0.0 3.82365    
cufflinks 0.772764 0.0 2.80761    
cufflinks 7.66845 0.0 21.6969   High
cufflinks 17.5885 0.0 46.3381   High
cufflinks 4.3173 0.0 13.0513    
cufflinks 0.0957437 0.0 0.415514 Low Low
cufflinks 1.14223 0.0 4.0335    

0 Strain