Gene : Phvul.011G139200 P. vulgaris v2.1
Defline:  (1 of 2) PTHR22957//PTHR22957:SF276 - TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  1380
Name:  ? Phvul.011G139200 Secondary Identifier:  ? PAC:37154674
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.011G139200 0.5kb upstream 0.5kb upstream 8065 true Chr11: 35525968-35534032 Phaseolus vulgaris
Phvul.011G139200 0.5kb upstream 0.5kb upstream 500 false Chr11: 35533533-35534032 Phaseolus vulgaris
Phvul.011G139200 0.5kb downstream 0.5kb downstream 8065 true Chr11: 35525468-35533532 Phaseolus vulgaris
Phvul.011G139200 0.5kb downstream 0.5kb downstream 500 false Chr11: 35525468-35525967 Phaseolus vulgaris
Phvul.011G139200 1.0kb upstream 1.0kb upstream 8565 true Chr11: 35525968-35534532 Phaseolus vulgaris
Phvul.011G139200 1.0kb upstream 1.0kb upstream 1000 false Chr11: 35533533-35534532 Phaseolus vulgaris
Phvul.011G139200 1.0kb downstream 1.0kb downstream 8565 true Chr11: 35524968-35533532 Phaseolus vulgaris
Phvul.011G139200 1.0kb downstream 1.0kb downstream 1000 false Chr11: 35524968-35525967 Phaseolus vulgaris
Phvul.011G139200 2.0kb upstream 2.0kb upstream 9565 true Chr11: 35525968-35535532 Phaseolus vulgaris
Phvul.011G139200 2.0kb upstream 2.0kb upstream 2000 false Chr11: 35533533-35535532 Phaseolus vulgaris
Phvul.011G139200 2.0kb downstream 2.0kb downstream 9565 true Chr11: 35523968-35533532 Phaseolus vulgaris
Phvul.011G139200 2.0kb downstream 2.0kb downstream 2000 false Chr11: 35523968-35525967 Phaseolus vulgaris
Phvul.011G139200 5.0kb upstream 5.0kb upstream 12565 true Chr11: 35525968-35538532 Phaseolus vulgaris
Phvul.011G139200 5.0kb upstream 5.0kb upstream 5000 false Chr11: 35533533-35538532 Phaseolus vulgaris
Phvul.011G139200 5.0kb downstream 5.0kb downstream 12565 true Chr11: 35520968-35533532 Phaseolus vulgaris
Phvul.011G139200 5.0kb downstream 5.0kb downstream 5000 false Chr11: 35520968-35525967 Phaseolus vulgaris
Phvul.011G139200 10.0kb upstream 10.0kb upstream 17565 true Chr11: 35525968-35543532 Phaseolus vulgaris
Phvul.011G139200 10.0kb upstream 10.0kb upstream 10000 false Chr11: 35533533-35543532 Phaseolus vulgaris
Phvul.011G139200 10.0kb downstream 10.0kb downstream 17565 true Chr11: 35515968-35533532 Phaseolus vulgaris
Phvul.011G139200 10.0kb downstream 10.0kb downstream 10000 false Chr11: 35515968-35525967 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314128 5265 Fabidae View MSA
124064798 5270 Rosid View MSA
123749746 5271 Pentapetalae View MSA
122789971 5272 Eudicot View MSA
122046428 5273 Angiosperm View MSA
121350403 5274 Embryophyte View MSA
123428253 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.84356 0.0 26.833    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 5.0528 0.0 14.9352    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain