Gene : Phvul.011G139700 P. vulgaris v2.1
Defline:  (1 of 1) PTHR13048 - TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 3 Genomic Order:  1386
Name:  ? Phvul.011G139700 Secondary Identifier:  ? PAC:37155211
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.011G139700 0.5kb upstream 0.5kb upstream 5886 true Chr11: 35706864-35712749 Phaseolus vulgaris
Phvul.011G139700 0.5kb upstream 0.5kb upstream 500 false Chr11: 35706864-35707363 Phaseolus vulgaris
Phvul.011G139700 0.5kb downstream 0.5kb downstream 5886 true Chr11: 35707364-35713249 Phaseolus vulgaris
Phvul.011G139700 0.5kb downstream 0.5kb downstream 500 false Chr11: 35712750-35713249 Phaseolus vulgaris
Phvul.011G139700 1.0kb upstream 1.0kb upstream 6386 true Chr11: 35706364-35712749 Phaseolus vulgaris
Phvul.011G139700 1.0kb upstream 1.0kb upstream 1000 false Chr11: 35706364-35707363 Phaseolus vulgaris
Phvul.011G139700 1.0kb downstream 1.0kb downstream 6386 true Chr11: 35707364-35713749 Phaseolus vulgaris
Phvul.011G139700 1.0kb downstream 1.0kb downstream 1000 false Chr11: 35712750-35713749 Phaseolus vulgaris
Phvul.011G139700 2.0kb upstream 2.0kb upstream 7386 true Chr11: 35705364-35712749 Phaseolus vulgaris
Phvul.011G139700 2.0kb upstream 2.0kb upstream 2000 false Chr11: 35705364-35707363 Phaseolus vulgaris
Phvul.011G139700 2.0kb downstream 2.0kb downstream 7386 true Chr11: 35707364-35714749 Phaseolus vulgaris
Phvul.011G139700 2.0kb downstream 2.0kb downstream 2000 false Chr11: 35712750-35714749 Phaseolus vulgaris
Phvul.011G139700 5.0kb upstream 5.0kb upstream 10386 true Chr11: 35702364-35712749 Phaseolus vulgaris
Phvul.011G139700 5.0kb upstream 5.0kb upstream 5000 false Chr11: 35702364-35707363 Phaseolus vulgaris
Phvul.011G139700 5.0kb downstream 5.0kb downstream 10386 true Chr11: 35707364-35717749 Phaseolus vulgaris
Phvul.011G139700 5.0kb downstream 5.0kb downstream 5000 false Chr11: 35712750-35717749 Phaseolus vulgaris
Phvul.011G139700 10.0kb upstream 10.0kb upstream 15386 true Chr11: 35697364-35712749 Phaseolus vulgaris
Phvul.011G139700 10.0kb upstream 10.0kb upstream 10000 false Chr11: 35697364-35707363 Phaseolus vulgaris
Phvul.011G139700 10.0kb downstream 10.0kb downstream 15386 true Chr11: 35707364-35722749 Phaseolus vulgaris
Phvul.011G139700 10.0kb downstream 10.0kb downstream 10000 false Chr11: 35712750-35722749 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305865 5265 Fabidae View MSA
124061574 5270 Rosid View MSA
123738457 5271 Pentapetalae View MSA
122793674 5272 Eudicot View MSA
122046284 5273 Angiosperm View MSA
121345634 5274 Embryophyte View MSA
123425946 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 28.7683 0.0 75.4502    
cufflinks 32.1839 0.0 84.0972    
cufflinks 25.5522 0.0 67.551    
cufflinks 46.4232 0.0 120.189 High High
cufflinks 29.9588 0.0 78.7161    
cufflinks 24.5162 0.0 65.1041    
cufflinks 19.2625 0.0 52.2387   Low
cufflinks 23.8697 0.0 63.4401    
cufflinks 24.4946 0.0 65.3171    
cufflinks 20.1984 0.0 54.4282   Low
cufflinks 33.4408 0.0 87.4101    

0 Strain