Gene : Phvul.011G139800 P. vulgaris v2.1
Defline:  (1 of 24) K05658 - ATP-binding cassette, subfamily B (MDR/TAP), member 1 (ABCB1) Genomic Order:  1387
Name:  ? Phvul.011G139800 Secondary Identifier:  ? PAC:37155286
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.011G139800 0.5kb upstream 0.5kb upstream 8880 true Chr11: 35714162-35723041 Phaseolus vulgaris
Phvul.011G139800 0.5kb upstream 0.5kb upstream 500 false Chr11: 35714162-35714661 Phaseolus vulgaris
Phvul.011G139800 0.5kb downstream 0.5kb downstream 8880 true Chr11: 35714662-35723541 Phaseolus vulgaris
Phvul.011G139800 0.5kb downstream 0.5kb downstream 500 false Chr11: 35723042-35723541 Phaseolus vulgaris
Phvul.011G139800 1.0kb upstream 1.0kb upstream 9380 true Chr11: 35713662-35723041 Phaseolus vulgaris
Phvul.011G139800 1.0kb upstream 1.0kb upstream 1000 false Chr11: 35713662-35714661 Phaseolus vulgaris
Phvul.011G139800 1.0kb downstream 1.0kb downstream 9380 true Chr11: 35714662-35724041 Phaseolus vulgaris
Phvul.011G139800 1.0kb downstream 1.0kb downstream 1000 false Chr11: 35723042-35724041 Phaseolus vulgaris
Phvul.011G139800 2.0kb upstream 2.0kb upstream 10380 true Chr11: 35712662-35723041 Phaseolus vulgaris
Phvul.011G139800 2.0kb upstream 2.0kb upstream 2000 false Chr11: 35712662-35714661 Phaseolus vulgaris
Phvul.011G139800 2.0kb downstream 2.0kb downstream 10380 true Chr11: 35714662-35725041 Phaseolus vulgaris
Phvul.011G139800 2.0kb downstream 2.0kb downstream 2000 false Chr11: 35723042-35725041 Phaseolus vulgaris
Phvul.011G139800 5.0kb upstream 5.0kb upstream 13380 true Chr11: 35709662-35723041 Phaseolus vulgaris
Phvul.011G139800 5.0kb upstream 5.0kb upstream 5000 false Chr11: 35709662-35714661 Phaseolus vulgaris
Phvul.011G139800 5.0kb downstream 5.0kb downstream 13380 true Chr11: 35714662-35728041 Phaseolus vulgaris
Phvul.011G139800 5.0kb downstream 5.0kb downstream 5000 false Chr11: 35723042-35728041 Phaseolus vulgaris
Phvul.011G139800 10.0kb upstream 10.0kb upstream 18380 true Chr11: 35704662-35723041 Phaseolus vulgaris
Phvul.011G139800 10.0kb upstream 10.0kb upstream 10000 false Chr11: 35704662-35714661 Phaseolus vulgaris
Phvul.011G139800 10.0kb downstream 10.0kb downstream 18380 true Chr11: 35714662-35733041 Phaseolus vulgaris
Phvul.011G139800 10.0kb downstream 10.0kb downstream 10000 false Chr11: 35723042-35733041 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308866 5265 Fabidae View MSA
124072133 5270 Rosid View MSA
123745153 5271 Pentapetalae View MSA
122796432 5272 Eudicot View MSA
122043732 5273 Angiosperm View MSA
121347881 5274 Embryophyte View MSA
123380663 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.21793 0.0 0.793775 Low Low
cufflinks 0.26376 0.0 0.943786 Low  
cufflinks 0.367273 0.0 1.26649 Low  
cufflinks 0.321994 0.0 1.14086 Low  
cufflinks 0.366355 0.0 1.27979 Low  
cufflinks 0.538797 0.0 1.78397 Low  
cufflinks 1.33758 0.0 3.98984   High
cufflinks 2.22941 0.0 6.26417   High
cufflinks 0.459667 0.0 1.55315 Low  
cufflinks 0.444786 0.0 1.50928    
cufflinks 0.350209 0.0 1.22507 Low  

0 Strain