Gene : Phvul.011G142300 P. vulgaris v2.1
Defline:  (1 of 55) PF03514 - GRAS domain family (GRAS) Genomic Order:  1410
Name:  ? Phvul.011G142300 Secondary Identifier:  ? PAC:37155877
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.011G142300 0.5kb upstream 0.5kb upstream 3724 true Chr11: 36527301-36531024 Phaseolus vulgaris
Phvul.011G142300 0.5kb upstream 0.5kb upstream 500 false Chr11: 36527301-36527800 Phaseolus vulgaris
Phvul.011G142300 0.5kb downstream 0.5kb downstream 3724 true Chr11: 36527801-36531524 Phaseolus vulgaris
Phvul.011G142300 0.5kb downstream 0.5kb downstream 500 false Chr11: 36531025-36531524 Phaseolus vulgaris
Phvul.011G142300 1.0kb upstream 1.0kb upstream 4224 true Chr11: 36526801-36531024 Phaseolus vulgaris
Phvul.011G142300 1.0kb upstream 1.0kb upstream 1000 false Chr11: 36526801-36527800 Phaseolus vulgaris
Phvul.011G142300 1.0kb downstream 1.0kb downstream 4224 true Chr11: 36527801-36532024 Phaseolus vulgaris
Phvul.011G142300 1.0kb downstream 1.0kb downstream 1000 false Chr11: 36531025-36532024 Phaseolus vulgaris
Phvul.011G142300 2.0kb upstream 2.0kb upstream 5224 true Chr11: 36525801-36531024 Phaseolus vulgaris
Phvul.011G142300 2.0kb upstream 2.0kb upstream 2000 false Chr11: 36525801-36527800 Phaseolus vulgaris
Phvul.011G142300 2.0kb downstream 2.0kb downstream 5224 true Chr11: 36527801-36533024 Phaseolus vulgaris
Phvul.011G142300 2.0kb downstream 2.0kb downstream 2000 false Chr11: 36531025-36533024 Phaseolus vulgaris
Phvul.011G142300 5.0kb upstream 5.0kb upstream 8224 true Chr11: 36522801-36531024 Phaseolus vulgaris
Phvul.011G142300 5.0kb upstream 5.0kb upstream 5000 false Chr11: 36522801-36527800 Phaseolus vulgaris
Phvul.011G142300 5.0kb downstream 5.0kb downstream 8224 true Chr11: 36527801-36536024 Phaseolus vulgaris
Phvul.011G142300 5.0kb downstream 5.0kb downstream 5000 false Chr11: 36531025-36536024 Phaseolus vulgaris
Phvul.011G142300 10.0kb upstream 10.0kb upstream 13224 true Chr11: 36517801-36531024 Phaseolus vulgaris
Phvul.011G142300 10.0kb upstream 10.0kb upstream 10000 false Chr11: 36517801-36527800 Phaseolus vulgaris
Phvul.011G142300 10.0kb downstream 10.0kb downstream 13224 true Chr11: 36527801-36541024 Phaseolus vulgaris
Phvul.011G142300 10.0kb downstream 10.0kb downstream 10000 false Chr11: 36531025-36541024 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122254936 5265 Fabidae View MSA
123996875 5270 Rosid View MSA
123743209 5271 Pentapetalae View MSA
122794651 5272 Eudicot View MSA
122048977 5273 Angiosperm View MSA
121350442 5274 Embryophyte View MSA
123381734 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.56741 0.0 12.5914   High
cufflinks 0.682144 0.0 2.95882    
cufflinks 0.635417 0.0 3.51731    
cufflinks 0.547848 0.0 3.31616 Low  
cufflinks 0.210389 0.0 1.76222 Low Low
cufflinks 0.842462 0.0 4.36207    
cufflinks 0.876161 0.0 4.51593    
cufflinks 0.824583 0.0 4.28397    
cufflinks 0.163718 0.0 0.654405 Low Low
cufflinks 1.78117 0.0 7.70774   High
cufflinks 0.567074 0.0 2.46149    

0 Strain