Gene : Phvul.011G124700 P. vulgaris v2.1
Defline:  (1 of 1) PTHR11266:SF37 - EXPRESSED PROTEIN Genomic Order:  1238
Name:  ? Phvul.011G124700 Secondary Identifier:  ? PAC:37155296
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.011G124700 0.5kb upstream 0.5kb upstream 4625 true Chr11: 25196379-25201003 Phaseolus vulgaris
Phvul.011G124700 0.5kb upstream 0.5kb upstream 500 false Chr11: 25196379-25196878 Phaseolus vulgaris
Phvul.011G124700 0.5kb downstream 0.5kb downstream 4625 true Chr11: 25196879-25201503 Phaseolus vulgaris
Phvul.011G124700 0.5kb downstream 0.5kb downstream 500 false Chr11: 25201004-25201503 Phaseolus vulgaris
Phvul.011G124700 1.0kb upstream 1.0kb upstream 5125 true Chr11: 25195879-25201003 Phaseolus vulgaris
Phvul.011G124700 1.0kb upstream 1.0kb upstream 1000 false Chr11: 25195879-25196878 Phaseolus vulgaris
Phvul.011G124700 1.0kb downstream 1.0kb downstream 5125 true Chr11: 25196879-25202003 Phaseolus vulgaris
Phvul.011G124700 1.0kb downstream 1.0kb downstream 1000 false Chr11: 25201004-25202003 Phaseolus vulgaris
Phvul.011G124700 2.0kb upstream 2.0kb upstream 6125 true Chr11: 25194879-25201003 Phaseolus vulgaris
Phvul.011G124700 2.0kb upstream 2.0kb upstream 2000 false Chr11: 25194879-25196878 Phaseolus vulgaris
Phvul.011G124700 2.0kb downstream 2.0kb downstream 6125 true Chr11: 25196879-25203003 Phaseolus vulgaris
Phvul.011G124700 2.0kb downstream 2.0kb downstream 2000 false Chr11: 25201004-25203003 Phaseolus vulgaris
Phvul.011G124700 5.0kb upstream 5.0kb upstream 9125 true Chr11: 25191879-25201003 Phaseolus vulgaris
Phvul.011G124700 5.0kb upstream 5.0kb upstream 5000 false Chr11: 25191879-25196878 Phaseolus vulgaris
Phvul.011G124700 5.0kb downstream 5.0kb downstream 9125 true Chr11: 25196879-25206003 Phaseolus vulgaris
Phvul.011G124700 5.0kb downstream 5.0kb downstream 5000 false Chr11: 25201004-25206003 Phaseolus vulgaris
Phvul.011G124700 10.0kb upstream 10.0kb upstream 14125 true Chr11: 25186879-25201003 Phaseolus vulgaris
Phvul.011G124700 10.0kb upstream 10.0kb upstream 10000 false Chr11: 25186879-25196878 Phaseolus vulgaris
Phvul.011G124700 10.0kb downstream 10.0kb downstream 14125 true Chr11: 25196879-25211003 Phaseolus vulgaris
Phvul.011G124700 10.0kb downstream 10.0kb downstream 10000 false Chr11: 25201004-25211003 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041168 5273 Angiosperm View MSA
122302208 5265 Fabidae View MSA
124060900 5270 Rosid View MSA
123751523 5271 Pentapetalae View MSA
122792564 5272 Eudicot View MSA
121344957 5274 Embryophyte View MSA
123428334 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.5251 0.0 32.3344    
cufflinks 10.2752 0.0 29.2129    
cufflinks 19.7201 0.0 52.8993   High
cufflinks 20.5956 0.0 55.3096   High
cufflinks 9.66858 0.0 27.6397    
cufflinks 9.13441 0.0 26.297    
cufflinks 4.69405 0.0 14.5788   Low
cufflinks 6.47822 0.0 19.322    
cufflinks 6.99097 0.0 20.8043    
cufflinks 6.68106 0.0 19.8202    
cufflinks 7.84222 0.0 22.9151    

0 Strain