Gene : Phvul.011G125500 P. vulgaris v2.1
Defline:  (1 of 1) K16812 - targeting protein for Xklp2 (TPX2) Genomic Order:  1231
Name:  ? Phvul.011G125500 Secondary Identifier:  ? PAC:37156768
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.011G125500 0.5kb upstream 0.5kb upstream 5305 true Chr11: 25008225-25013529 Phaseolus vulgaris
Phvul.011G125500 0.5kb upstream 0.5kb upstream 500 false Chr11: 25013030-25013529 Phaseolus vulgaris
Phvul.011G125500 0.5kb downstream 0.5kb downstream 5305 true Chr11: 25007725-25013029 Phaseolus vulgaris
Phvul.011G125500 0.5kb downstream 0.5kb downstream 500 false Chr11: 25007725-25008224 Phaseolus vulgaris
Phvul.011G125500 1.0kb upstream 1.0kb upstream 5805 true Chr11: 25008225-25014029 Phaseolus vulgaris
Phvul.011G125500 1.0kb upstream 1.0kb upstream 1000 false Chr11: 25013030-25014029 Phaseolus vulgaris
Phvul.011G125500 1.0kb downstream 1.0kb downstream 5805 true Chr11: 25007225-25013029 Phaseolus vulgaris
Phvul.011G125500 1.0kb downstream 1.0kb downstream 1000 false Chr11: 25007225-25008224 Phaseolus vulgaris
Phvul.011G125500 2.0kb upstream 2.0kb upstream 6805 true Chr11: 25008225-25015029 Phaseolus vulgaris
Phvul.011G125500 2.0kb upstream 2.0kb upstream 2000 false Chr11: 25013030-25015029 Phaseolus vulgaris
Phvul.011G125500 2.0kb downstream 2.0kb downstream 6805 true Chr11: 25006225-25013029 Phaseolus vulgaris
Phvul.011G125500 2.0kb downstream 2.0kb downstream 2000 false Chr11: 25006225-25008224 Phaseolus vulgaris
Phvul.011G125500 5.0kb upstream 5.0kb upstream 9805 true Chr11: 25008225-25018029 Phaseolus vulgaris
Phvul.011G125500 5.0kb upstream 5.0kb upstream 5000 false Chr11: 25013030-25018029 Phaseolus vulgaris
Phvul.011G125500 5.0kb downstream 5.0kb downstream 9805 true Chr11: 25003225-25013029 Phaseolus vulgaris
Phvul.011G125500 5.0kb downstream 5.0kb downstream 5000 false Chr11: 25003225-25008224 Phaseolus vulgaris
Phvul.011G125500 10.0kb upstream 10.0kb upstream 14805 true Chr11: 25008225-25023029 Phaseolus vulgaris
Phvul.011G125500 10.0kb upstream 10.0kb upstream 10000 false Chr11: 25013030-25023029 Phaseolus vulgaris
Phvul.011G125500 10.0kb downstream 10.0kb downstream 14805 true Chr11: 24998225-25013029 Phaseolus vulgaris
Phvul.011G125500 10.0kb downstream 10.0kb downstream 10000 false Chr11: 24998225-25008224 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308804 5265 Fabidae View MSA
124067346 5270 Rosid View MSA
123743468 5271 Pentapetalae View MSA
122789058 5272 Eudicot View MSA
122045495 5273 Angiosperm View MSA
121349946 5274 Embryophyte View MSA
123426032 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.11609 0.0 5.00181    
cufflinks 9.02593 0.0 29.5686    
cufflinks 1.39888 0.0 5.87594    
cufflinks 0.733554 0.0 3.81411    
cufflinks 4.24348 0.0 14.0793    
cufflinks 10.6635 0.0 34.3275    
cufflinks 7.26948 0.0 24.4487    
cufflinks 3.95682 0.0 14.8244    
cufflinks 7.54498 0.0 25.1117    
cufflinks 0.0480466 0.0 0.209269 Low Low
cufflinks 4.16782 0.0 15.852    

0 Strain