Gene : Phvul.011G128300 P. vulgaris v2.1
Defline:  (1 of 1) PTHR23105//PTHR23105:SF51 - RIBOSOMAL PROTEIN L7AE FAMILY MEMBER // SUBFAMILY NOT NAMED Genomic Order:  1303
Name:  ? Phvul.011G128300 Secondary Identifier:  ? PAC:37157282
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.011G128300 0.5kb upstream 0.5kb upstream 7156 true Chr11: 32171332-32178487 Phaseolus vulgaris
Phvul.011G128300 0.5kb upstream 0.5kb upstream 500 false Chr11: 32171332-32171831 Phaseolus vulgaris
Phvul.011G128300 0.5kb downstream 0.5kb downstream 7156 true Chr11: 32171832-32178987 Phaseolus vulgaris
Phvul.011G128300 0.5kb downstream 0.5kb downstream 500 false Chr11: 32178488-32178987 Phaseolus vulgaris
Phvul.011G128300 1.0kb upstream 1.0kb upstream 7656 true Chr11: 32170832-32178487 Phaseolus vulgaris
Phvul.011G128300 1.0kb upstream 1.0kb upstream 1000 false Chr11: 32170832-32171831 Phaseolus vulgaris
Phvul.011G128300 1.0kb downstream 1.0kb downstream 7656 true Chr11: 32171832-32179487 Phaseolus vulgaris
Phvul.011G128300 1.0kb downstream 1.0kb downstream 1000 false Chr11: 32178488-32179487 Phaseolus vulgaris
Phvul.011G128300 2.0kb upstream 2.0kb upstream 8656 true Chr11: 32169832-32178487 Phaseolus vulgaris
Phvul.011G128300 2.0kb upstream 2.0kb upstream 2000 false Chr11: 32169832-32171831 Phaseolus vulgaris
Phvul.011G128300 2.0kb downstream 2.0kb downstream 8656 true Chr11: 32171832-32180487 Phaseolus vulgaris
Phvul.011G128300 2.0kb downstream 2.0kb downstream 2000 false Chr11: 32178488-32180487 Phaseolus vulgaris
Phvul.011G128300 5.0kb upstream 5.0kb upstream 11656 true Chr11: 32166832-32178487 Phaseolus vulgaris
Phvul.011G128300 5.0kb upstream 5.0kb upstream 5000 false Chr11: 32166832-32171831 Phaseolus vulgaris
Phvul.011G128300 5.0kb downstream 5.0kb downstream 11656 true Chr11: 32171832-32183487 Phaseolus vulgaris
Phvul.011G128300 5.0kb downstream 5.0kb downstream 5000 false Chr11: 32178488-32183487 Phaseolus vulgaris
Phvul.011G128300 10.0kb upstream 10.0kb upstream 16656 true Chr11: 32161832-32178487 Phaseolus vulgaris
Phvul.011G128300 10.0kb upstream 10.0kb upstream 10000 false Chr11: 32161832-32171831 Phaseolus vulgaris
Phvul.011G128300 10.0kb downstream 10.0kb downstream 16656 true Chr11: 32171832-32188487 Phaseolus vulgaris
Phvul.011G128300 10.0kb downstream 10.0kb downstream 10000 false Chr11: 32178488-32188487 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308683 5265 Fabidae View MSA
124068944 5270 Rosid View MSA
123740945 5271 Pentapetalae View MSA
122793380 5272 Eudicot View MSA
122043496 5273 Angiosperm View MSA
121348791 5274 Embryophyte View MSA
123427528 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.4758 0.0 30.4704   Low
cufflinks 23.1147 0.0 59.7589   High
cufflinks 15.4404 0.0 40.3523    
cufflinks 20.0113 0.0 51.8266   High
cufflinks 14.4681 0.0 37.8595    
cufflinks 10.5517 0.0 28.1991   Low
cufflinks 13.7003 0.0 35.8593    
cufflinks 18.6829 0.0 48.4295    
cufflinks 17.2827 0.0 44.8595    
cufflinks 16.0219 0.0 41.7751    
cufflinks 14.7174 0.0 38.4631    

0 Strain