Gene : Phvul.011G127600 P. vulgaris v2.1
Defline:  (1 of 10) PF07939 - Protein of unknown function (DUF1685) (DUF1685) Genomic Order:  1311
Name:  ? Phvul.011G127600 Secondary Identifier:  ? PAC:37154736
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.011G127600 0.5kb upstream 0.5kb upstream 1685 true Chr11: 32410081-32411765 Phaseolus vulgaris
Phvul.011G127600 0.5kb upstream 0.5kb upstream 500 false Chr11: 32410081-32410580 Phaseolus vulgaris
Phvul.011G127600 0.5kb downstream 0.5kb downstream 1685 true Chr11: 32410581-32412265 Phaseolus vulgaris
Phvul.011G127600 0.5kb downstream 0.5kb downstream 500 false Chr11: 32411766-32412265 Phaseolus vulgaris
Phvul.011G127600 1.0kb upstream 1.0kb upstream 2185 true Chr11: 32409581-32411765 Phaseolus vulgaris
Phvul.011G127600 1.0kb upstream 1.0kb upstream 1000 false Chr11: 32409581-32410580 Phaseolus vulgaris
Phvul.011G127600 1.0kb downstream 1.0kb downstream 2185 true Chr11: 32410581-32412765 Phaseolus vulgaris
Phvul.011G127600 1.0kb downstream 1.0kb downstream 1000 false Chr11: 32411766-32412765 Phaseolus vulgaris
Phvul.011G127600 2.0kb upstream 2.0kb upstream 3185 true Chr11: 32408581-32411765 Phaseolus vulgaris
Phvul.011G127600 2.0kb upstream 2.0kb upstream 2000 false Chr11: 32408581-32410580 Phaseolus vulgaris
Phvul.011G127600 2.0kb downstream 2.0kb downstream 3185 true Chr11: 32410581-32413765 Phaseolus vulgaris
Phvul.011G127600 2.0kb downstream 2.0kb downstream 2000 false Chr11: 32411766-32413765 Phaseolus vulgaris
Phvul.011G127600 5.0kb upstream 5.0kb upstream 6185 true Chr11: 32405581-32411765 Phaseolus vulgaris
Phvul.011G127600 5.0kb upstream 5.0kb upstream 5000 false Chr11: 32405581-32410580 Phaseolus vulgaris
Phvul.011G127600 5.0kb downstream 5.0kb downstream 6185 true Chr11: 32410581-32416765 Phaseolus vulgaris
Phvul.011G127600 5.0kb downstream 5.0kb downstream 5000 false Chr11: 32411766-32416765 Phaseolus vulgaris
Phvul.011G127600 10.0kb upstream 10.0kb upstream 11185 true Chr11: 32400581-32411765 Phaseolus vulgaris
Phvul.011G127600 10.0kb upstream 10.0kb upstream 10000 false Chr11: 32400581-32410580 Phaseolus vulgaris
Phvul.011G127600 10.0kb downstream 10.0kb downstream 11185 true Chr11: 32410581-32421765 Phaseolus vulgaris
Phvul.011G127600 10.0kb downstream 10.0kb downstream 10000 false Chr11: 32411766-32421765 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310767 5265 Fabidae View MSA
124069452 5270 Rosid View MSA
123750929 5271 Pentapetalae View MSA
122791685 5272 Eudicot View MSA
122049141 5273 Angiosperm View MSA
121350568 5274 Embryophyte View MSA
123381799 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.3052 0.0 36.6266   High
cufflinks 3.86663 0.0 12.1832    
cufflinks 9.7007 0.0 27.464   High
cufflinks 3.22962 0.0 10.4944    
cufflinks 1.91745 0.0 6.60214   Low
cufflinks 7.35632 0.0 21.5015    
cufflinks 3.57258 0.0 11.3554    
cufflinks 4.95233 0.0 15.0831    
cufflinks 3.61123 0.0 11.5072    
cufflinks 7.66634 0.0 22.3782    
cufflinks 1.97635 0.0 6.76725   Low

0 Strain