Gene : Phvul.011G132300 P. vulgaris v2.1
Genomic Order:  1353 Name:  ? Phvul.011G132300
Secondary Identifier:  ? PAC:37155860
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.011G132300 0.5kb upstream 0.5kb upstream 1871 true Chr11: 34184683-34186553 Phaseolus vulgaris
Phvul.011G132300 0.5kb upstream 0.5kb upstream 500 false Chr11: 34184683-34185182 Phaseolus vulgaris
Phvul.011G132300 0.5kb downstream 0.5kb downstream 1871 true Chr11: 34185183-34187053 Phaseolus vulgaris
Phvul.011G132300 0.5kb downstream 0.5kb downstream 500 false Chr11: 34186554-34187053 Phaseolus vulgaris
Phvul.011G132300 1.0kb upstream 1.0kb upstream 2371 true Chr11: 34184183-34186553 Phaseolus vulgaris
Phvul.011G132300 1.0kb upstream 1.0kb upstream 1000 false Chr11: 34184183-34185182 Phaseolus vulgaris
Phvul.011G132300 1.0kb downstream 1.0kb downstream 2371 true Chr11: 34185183-34187553 Phaseolus vulgaris
Phvul.011G132300 1.0kb downstream 1.0kb downstream 1000 false Chr11: 34186554-34187553 Phaseolus vulgaris
Phvul.011G132300 2.0kb upstream 2.0kb upstream 3371 true Chr11: 34183183-34186553 Phaseolus vulgaris
Phvul.011G132300 2.0kb upstream 2.0kb upstream 2000 false Chr11: 34183183-34185182 Phaseolus vulgaris
Phvul.011G132300 2.0kb downstream 2.0kb downstream 3371 true Chr11: 34185183-34188553 Phaseolus vulgaris
Phvul.011G132300 2.0kb downstream 2.0kb downstream 2000 false Chr11: 34186554-34188553 Phaseolus vulgaris
Phvul.011G132300 5.0kb upstream 5.0kb upstream 6371 true Chr11: 34180183-34186553 Phaseolus vulgaris
Phvul.011G132300 5.0kb upstream 5.0kb upstream 5000 false Chr11: 34180183-34185182 Phaseolus vulgaris
Phvul.011G132300 5.0kb downstream 5.0kb downstream 6371 true Chr11: 34185183-34191553 Phaseolus vulgaris
Phvul.011G132300 5.0kb downstream 5.0kb downstream 5000 false Chr11: 34186554-34191553 Phaseolus vulgaris
Phvul.011G132300 10.0kb upstream 10.0kb upstream 11371 true Chr11: 34175183-34186553 Phaseolus vulgaris
Phvul.011G132300 10.0kb upstream 10.0kb upstream 10000 false Chr11: 34175183-34185182 Phaseolus vulgaris
Phvul.011G132300 10.0kb downstream 10.0kb downstream 11371 true Chr11: 34185183-34196553 Phaseolus vulgaris
Phvul.011G132300 10.0kb downstream 10.0kb downstream 10000 false Chr11: 34186554-34196553 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029303 5273 Angiosperm View MSA
122315402 5265 Fabidae View MSA
124072017 5270 Rosid View MSA
123742504 5271 Pentapetalae View MSA
122796407 5272 Eudicot View MSA
121298649 5274 Embryophyte View MSA
123336609 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.60535 0.0 9.26014    
cufflinks 1.67661 0.0 6.22084    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.73152 0.0 6.43517    
cufflinks 0.244398 0.0 1.07043 Low Low
cufflinks 0.178262 0.0 0.800034 Low Low
cufflinks 11.1408 0.0 33.7053   High
cufflinks 4.72768 0.0 15.7641    
cufflinks 16.0898 0.0 46.7615   High
cufflinks 0.813032 0.0 3.20407    
cufflinks 0.483925 0.0 1.98346 Low  

0 Strain