Gene : Phvul.011G112000 P. vulgaris v2.1
Defline:  (1 of 10) PF04484 - Family of unknown function (DUF566) (DUF566) Genomic Order:  1124
Name:  ? Phvul.011G112000 Secondary Identifier:  ? PAC:37156038
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.011G112000 0.5kb upstream 0.5kb upstream 3283 true Chr11: 14637484-14640766 Phaseolus vulgaris
Phvul.011G112000 0.5kb upstream 0.5kb upstream 500 false Chr11: 14637484-14637983 Phaseolus vulgaris
Phvul.011G112000 0.5kb downstream 0.5kb downstream 3283 true Chr11: 14637984-14641266 Phaseolus vulgaris
Phvul.011G112000 0.5kb downstream 0.5kb downstream 500 false Chr11: 14640767-14641266 Phaseolus vulgaris
Phvul.011G112000 1.0kb upstream 1.0kb upstream 3783 true Chr11: 14636984-14640766 Phaseolus vulgaris
Phvul.011G112000 1.0kb upstream 1.0kb upstream 1000 false Chr11: 14636984-14637983 Phaseolus vulgaris
Phvul.011G112000 1.0kb downstream 1.0kb downstream 3783 true Chr11: 14637984-14641766 Phaseolus vulgaris
Phvul.011G112000 1.0kb downstream 1.0kb downstream 1000 false Chr11: 14640767-14641766 Phaseolus vulgaris
Phvul.011G112000 2.0kb upstream 2.0kb upstream 4783 true Chr11: 14635984-14640766 Phaseolus vulgaris
Phvul.011G112000 2.0kb upstream 2.0kb upstream 2000 false Chr11: 14635984-14637983 Phaseolus vulgaris
Phvul.011G112000 2.0kb downstream 2.0kb downstream 4783 true Chr11: 14637984-14642766 Phaseolus vulgaris
Phvul.011G112000 2.0kb downstream 2.0kb downstream 2000 false Chr11: 14640767-14642766 Phaseolus vulgaris
Phvul.011G112000 5.0kb upstream 5.0kb upstream 7783 true Chr11: 14632984-14640766 Phaseolus vulgaris
Phvul.011G112000 5.0kb upstream 5.0kb upstream 5000 false Chr11: 14632984-14637983 Phaseolus vulgaris
Phvul.011G112000 5.0kb downstream 5.0kb downstream 7783 true Chr11: 14637984-14645766 Phaseolus vulgaris
Phvul.011G112000 5.0kb downstream 5.0kb downstream 5000 false Chr11: 14640767-14645766 Phaseolus vulgaris
Phvul.011G112000 10.0kb upstream 10.0kb upstream 12783 true Chr11: 14627984-14640766 Phaseolus vulgaris
Phvul.011G112000 10.0kb upstream 10.0kb upstream 10000 false Chr11: 14627984-14637983 Phaseolus vulgaris
Phvul.011G112000 10.0kb downstream 10.0kb downstream 12783 true Chr11: 14637984-14650766 Phaseolus vulgaris
Phvul.011G112000 10.0kb downstream 10.0kb downstream 10000 false Chr11: 14640767-14650766 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026460 5273 Angiosperm View MSA
122255072 5265 Fabidae View MSA
124067375 5270 Rosid View MSA
123749787 5271 Pentapetalae View MSA
122794883 5272 Eudicot View MSA
121296342 5274 Embryophyte View MSA
123426167 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.242181 0.0 0.95067 Low  
cufflinks 0.211543 0.0 0.840545 Low  
cufflinks 0.0351785 0.0 0.164308 Low Low
cufflinks 0.238438 0.0 0.942454 Low  
cufflinks 0.14708 0.0 0.605313 Low  
cufflinks 0.982608 0.0 3.4218   High
cufflinks 0.136853 0.0 0.562648 Low  
cufflinks 0.344022 0.0 1.3119 Low  
cufflinks 0.228077 0.0 0.902598 Low  
cufflinks 0.0430741 0.0 0.197532 Low Low
cufflinks 0.257607 0.0 1.01194 Low  

0 Strain