Gene : Phvul.011G112300 P. vulgaris v2.1
Defline:  (1 of 1) PTHR34053:SF1 - PROTEIN ULTRAPETALA 1-RELATED Genomic Order:  1128
Name:  ? Phvul.011G112300 Secondary Identifier:  ? PAC:37154776
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.011G112300 0.5kb upstream 0.5kb upstream 4755 true Chr11: 14741771-14746525 Phaseolus vulgaris
Phvul.011G112300 0.5kb upstream 0.5kb upstream 500 false Chr11: 14741771-14742270 Phaseolus vulgaris
Phvul.011G112300 0.5kb downstream 0.5kb downstream 4755 true Chr11: 14742271-14747025 Phaseolus vulgaris
Phvul.011G112300 0.5kb downstream 0.5kb downstream 500 false Chr11: 14746526-14747025 Phaseolus vulgaris
Phvul.011G112300 1.0kb upstream 1.0kb upstream 5255 true Chr11: 14741271-14746525 Phaseolus vulgaris
Phvul.011G112300 1.0kb upstream 1.0kb upstream 1000 false Chr11: 14741271-14742270 Phaseolus vulgaris
Phvul.011G112300 1.0kb downstream 1.0kb downstream 5255 true Chr11: 14742271-14747525 Phaseolus vulgaris
Phvul.011G112300 1.0kb downstream 1.0kb downstream 1000 false Chr11: 14746526-14747525 Phaseolus vulgaris
Phvul.011G112300 2.0kb upstream 2.0kb upstream 6255 true Chr11: 14740271-14746525 Phaseolus vulgaris
Phvul.011G112300 2.0kb upstream 2.0kb upstream 2000 false Chr11: 14740271-14742270 Phaseolus vulgaris
Phvul.011G112300 2.0kb downstream 2.0kb downstream 6255 true Chr11: 14742271-14748525 Phaseolus vulgaris
Phvul.011G112300 2.0kb downstream 2.0kb downstream 2000 false Chr11: 14746526-14748525 Phaseolus vulgaris
Phvul.011G112300 5.0kb upstream 5.0kb upstream 9255 true Chr11: 14737271-14746525 Phaseolus vulgaris
Phvul.011G112300 5.0kb upstream 5.0kb upstream 5000 false Chr11: 14737271-14742270 Phaseolus vulgaris
Phvul.011G112300 5.0kb downstream 5.0kb downstream 9255 true Chr11: 14742271-14751525 Phaseolus vulgaris
Phvul.011G112300 5.0kb downstream 5.0kb downstream 5000 false Chr11: 14746526-14751525 Phaseolus vulgaris
Phvul.011G112300 10.0kb upstream 10.0kb upstream 14255 true Chr11: 14732271-14746525 Phaseolus vulgaris
Phvul.011G112300 10.0kb upstream 10.0kb upstream 10000 false Chr11: 14732271-14742270 Phaseolus vulgaris
Phvul.011G112300 10.0kb downstream 10.0kb downstream 14255 true Chr11: 14742271-14756525 Phaseolus vulgaris
Phvul.011G112300 10.0kb downstream 10.0kb downstream 10000 false Chr11: 14746526-14756525 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299051 5265 Fabidae View MSA
124065655 5270 Rosid View MSA
123743766 5271 Pentapetalae View MSA
122795769 5272 Eudicot View MSA
122043441 5273 Angiosperm View MSA
121310126 5274 Embryophyte View MSA
123347700 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.3609 0.0 36.1782    
cufflinks 12.132 0.0 33.1541   Low
cufflinks 14.0369 0.0 37.8761    
cufflinks 11.0183 0.0 30.4938   Low
cufflinks 19.2453 0.0 50.8517    
cufflinks 18.7934 0.0 49.6867    
cufflinks 22.2734 0.0 58.2561   High
cufflinks 19.1895 0.0 50.602    
cufflinks 27.7544 0.0 72.0426   High
cufflinks 12.1574 0.0 33.2457   Low
cufflinks 17.5263 0.0 46.5502    

0 Strain