Gene : Phvul.011G109500 P. vulgaris v2.1
Defline:  (1 of 4) PTHR10641//PTHR10641:SF541 - MYB-LIKE DNA-BINDING PROTEIN MYB // SUBFAMILY NOT NAMED Genomic Order:  1099
Name:  ? Phvul.011G109500 Secondary Identifier:  ? PAC:37157086
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.011G109500 0.5kb upstream 0.5kb upstream 5458 true Chr11: 13796851-13802308 Phaseolus vulgaris
Phvul.011G109500 0.5kb upstream 0.5kb upstream 500 false Chr11: 13796851-13797350 Phaseolus vulgaris
Phvul.011G109500 0.5kb downstream 0.5kb downstream 5458 true Chr11: 13797351-13802808 Phaseolus vulgaris
Phvul.011G109500 0.5kb downstream 0.5kb downstream 500 false Chr11: 13802309-13802808 Phaseolus vulgaris
Phvul.011G109500 1.0kb upstream 1.0kb upstream 5958 true Chr11: 13796351-13802308 Phaseolus vulgaris
Phvul.011G109500 1.0kb upstream 1.0kb upstream 1000 false Chr11: 13796351-13797350 Phaseolus vulgaris
Phvul.011G109500 1.0kb downstream 1.0kb downstream 5958 true Chr11: 13797351-13803308 Phaseolus vulgaris
Phvul.011G109500 1.0kb downstream 1.0kb downstream 1000 false Chr11: 13802309-13803308 Phaseolus vulgaris
Phvul.011G109500 2.0kb upstream 2.0kb upstream 6958 true Chr11: 13795351-13802308 Phaseolus vulgaris
Phvul.011G109500 2.0kb upstream 2.0kb upstream 2000 false Chr11: 13795351-13797350 Phaseolus vulgaris
Phvul.011G109500 2.0kb downstream 2.0kb downstream 6958 true Chr11: 13797351-13804308 Phaseolus vulgaris
Phvul.011G109500 2.0kb downstream 2.0kb downstream 2000 false Chr11: 13802309-13804308 Phaseolus vulgaris
Phvul.011G109500 5.0kb upstream 5.0kb upstream 9958 true Chr11: 13792351-13802308 Phaseolus vulgaris
Phvul.011G109500 5.0kb upstream 5.0kb upstream 5000 false Chr11: 13792351-13797350 Phaseolus vulgaris
Phvul.011G109500 5.0kb downstream 5.0kb downstream 9958 true Chr11: 13797351-13807308 Phaseolus vulgaris
Phvul.011G109500 5.0kb downstream 5.0kb downstream 5000 false Chr11: 13802309-13807308 Phaseolus vulgaris
Phvul.011G109500 10.0kb upstream 10.0kb upstream 14958 true Chr11: 13787351-13802308 Phaseolus vulgaris
Phvul.011G109500 10.0kb upstream 10.0kb upstream 10000 false Chr11: 13787351-13797350 Phaseolus vulgaris
Phvul.011G109500 10.0kb downstream 10.0kb downstream 14958 true Chr11: 13797351-13812308 Phaseolus vulgaris
Phvul.011G109500 10.0kb downstream 10.0kb downstream 10000 false Chr11: 13802309-13812308 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313986 5265 Fabidae View MSA
124074146 5270 Rosid View MSA
123753515 5271 Pentapetalae View MSA
122794930 5272 Eudicot View MSA
122045941 5273 Angiosperm View MSA
121350389 5274 Embryophyte View MSA
123381710 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.795412 0.0 3.02458   High
cufflinks 0.580482 0.0 2.26371    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.98606 0.0 3.68931   High
cufflinks 0.078791 0.0 0.369968 Low  
cufflinks 0.278461 0.0 1.14849 Low  
cufflinks 0.0472709 0.0 0.23151 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.120297 0.0 0.539441 Low  
cufflinks 0.183834 0.0 0.791166 Low  

0 Strain