Gene : Phvul.011G114300 P. vulgaris v2.1
Defline:  (1 of 2) PTHR31533:SF2 - GPI-ANCHORED PROTEIN LORELEI-RELATED Genomic Order:  1149
Name:  ? Phvul.011G114300 Secondary Identifier:  ? PAC:37157285
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.011G114300 0.5kb upstream 0.5kb upstream 2758 true Chr11: 15512176-15514933 Phaseolus vulgaris
Phvul.011G114300 0.5kb upstream 0.5kb upstream 500 false Chr11: 15514434-15514933 Phaseolus vulgaris
Phvul.011G114300 0.5kb downstream 0.5kb downstream 2758 true Chr11: 15511676-15514433 Phaseolus vulgaris
Phvul.011G114300 0.5kb downstream 0.5kb downstream 500 false Chr11: 15511676-15512175 Phaseolus vulgaris
Phvul.011G114300 1.0kb upstream 1.0kb upstream 3258 true Chr11: 15512176-15515433 Phaseolus vulgaris
Phvul.011G114300 1.0kb upstream 1.0kb upstream 1000 false Chr11: 15514434-15515433 Phaseolus vulgaris
Phvul.011G114300 1.0kb downstream 1.0kb downstream 3258 true Chr11: 15511176-15514433 Phaseolus vulgaris
Phvul.011G114300 1.0kb downstream 1.0kb downstream 1000 false Chr11: 15511176-15512175 Phaseolus vulgaris
Phvul.011G114300 2.0kb upstream 2.0kb upstream 4258 true Chr11: 15512176-15516433 Phaseolus vulgaris
Phvul.011G114300 2.0kb upstream 2.0kb upstream 2000 false Chr11: 15514434-15516433 Phaseolus vulgaris
Phvul.011G114300 2.0kb downstream 2.0kb downstream 4258 true Chr11: 15510176-15514433 Phaseolus vulgaris
Phvul.011G114300 2.0kb downstream 2.0kb downstream 2000 false Chr11: 15510176-15512175 Phaseolus vulgaris
Phvul.011G114300 5.0kb upstream 5.0kb upstream 7258 true Chr11: 15512176-15519433 Phaseolus vulgaris
Phvul.011G114300 5.0kb upstream 5.0kb upstream 5000 false Chr11: 15514434-15519433 Phaseolus vulgaris
Phvul.011G114300 5.0kb downstream 5.0kb downstream 7258 true Chr11: 15507176-15514433 Phaseolus vulgaris
Phvul.011G114300 5.0kb downstream 5.0kb downstream 5000 false Chr11: 15507176-15512175 Phaseolus vulgaris
Phvul.011G114300 10.0kb upstream 10.0kb upstream 12258 true Chr11: 15512176-15524433 Phaseolus vulgaris
Phvul.011G114300 10.0kb upstream 10.0kb upstream 10000 false Chr11: 15514434-15524433 Phaseolus vulgaris
Phvul.011G114300 10.0kb downstream 10.0kb downstream 12258 true Chr11: 15502176-15514433 Phaseolus vulgaris
Phvul.011G114300 10.0kb downstream 10.0kb downstream 10000 false Chr11: 15502176-15512175 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309501 5265 Fabidae View MSA
124072750 5270 Rosid View MSA
123750989 5271 Pentapetalae View MSA
122787745 5272 Eudicot View MSA
122045868 5273 Angiosperm View MSA
121350043 5274 Embryophyte View MSA
123381553 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.23814 0.0 19.8254    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 4.84572 0.0 15.8624    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain