Gene : Phvul.011G114600 P. vulgaris v2.1
Defline:  (1 of 1) PTHR10794:SF38 - CAAX AMINO TERMINAL PROTEASE FAMILY PROTEIN Genomic Order:  1153
Name:  ? Phvul.011G114600 Secondary Identifier:  ? PAC:37156383
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.011G114600 0.5kb upstream 0.5kb upstream 4177 true Chr11: 15754146-15758322 Phaseolus vulgaris
Phvul.011G114600 0.5kb upstream 0.5kb upstream 500 false Chr11: 15757823-15758322 Phaseolus vulgaris
Phvul.011G114600 0.5kb downstream 0.5kb downstream 4177 true Chr11: 15753646-15757822 Phaseolus vulgaris
Phvul.011G114600 0.5kb downstream 0.5kb downstream 500 false Chr11: 15753646-15754145 Phaseolus vulgaris
Phvul.011G114600 1.0kb upstream 1.0kb upstream 4677 true Chr11: 15754146-15758822 Phaseolus vulgaris
Phvul.011G114600 1.0kb upstream 1.0kb upstream 1000 false Chr11: 15757823-15758822 Phaseolus vulgaris
Phvul.011G114600 1.0kb downstream 1.0kb downstream 4677 true Chr11: 15753146-15757822 Phaseolus vulgaris
Phvul.011G114600 1.0kb downstream 1.0kb downstream 1000 false Chr11: 15753146-15754145 Phaseolus vulgaris
Phvul.011G114600 2.0kb upstream 2.0kb upstream 5677 true Chr11: 15754146-15759822 Phaseolus vulgaris
Phvul.011G114600 2.0kb upstream 2.0kb upstream 2000 false Chr11: 15757823-15759822 Phaseolus vulgaris
Phvul.011G114600 2.0kb downstream 2.0kb downstream 5677 true Chr11: 15752146-15757822 Phaseolus vulgaris
Phvul.011G114600 2.0kb downstream 2.0kb downstream 2000 false Chr11: 15752146-15754145 Phaseolus vulgaris
Phvul.011G114600 5.0kb upstream 5.0kb upstream 8677 true Chr11: 15754146-15762822 Phaseolus vulgaris
Phvul.011G114600 5.0kb upstream 5.0kb upstream 5000 false Chr11: 15757823-15762822 Phaseolus vulgaris
Phvul.011G114600 5.0kb downstream 5.0kb downstream 8677 true Chr11: 15749146-15757822 Phaseolus vulgaris
Phvul.011G114600 5.0kb downstream 5.0kb downstream 5000 false Chr11: 15749146-15754145 Phaseolus vulgaris
Phvul.011G114600 10.0kb upstream 10.0kb upstream 13677 true Chr11: 15754146-15767822 Phaseolus vulgaris
Phvul.011G114600 10.0kb upstream 10.0kb upstream 10000 false Chr11: 15757823-15767822 Phaseolus vulgaris
Phvul.011G114600 10.0kb downstream 10.0kb downstream 13677 true Chr11: 15744146-15757822 Phaseolus vulgaris
Phvul.011G114600 10.0kb downstream 10.0kb downstream 10000 false Chr11: 15744146-15754145 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027170 5273 Angiosperm View MSA
122308239 5265 Fabidae View MSA
124061477 5270 Rosid View MSA
123739167 5271 Pentapetalae View MSA
122788246 5272 Eudicot View MSA
121344310 5274 Embryophyte View MSA
123428279 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.195262 0.0 0.839628 Low  
cufflinks 0.187843 0.0 0.813062 Low  
cufflinks 2.50373 0.0 8.63377   High
cufflinks 0.0970357 0.0 0.450744 Low Low
cufflinks 1.01412 0.0 3.82681   High
cufflinks 1.67971 0.0 6.05828   High
cufflinks 0.170237 0.0 0.744719 Low  
cufflinks 0.0807724 0.0 0.37916 Low Low
cufflinks 0.381646 0.0 1.55942 Low  
cufflinks 0.157736 0.0 0.694787 Low  
cufflinks 0.259927 0.0 1.0961 Low  

0 Strain