Gene : Phvul.011G113300 P. vulgaris v2.1
Defline:  (1 of 2) PTHR13832:SF193 - PROTEIN PHOSPHATASE 2C 1-RELATED Genomic Order:  1140
Name:  ? Phvul.011G113300 Secondary Identifier:  ? PAC:37155561
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.011G113300 0.5kb upstream 0.5kb upstream 4712 true Chr11: 15078728-15083439 Phaseolus vulgaris
Phvul.011G113300 0.5kb upstream 0.5kb upstream 500 false Chr11: 15082940-15083439 Phaseolus vulgaris
Phvul.011G113300 0.5kb downstream 0.5kb downstream 4712 true Chr11: 15078228-15082939 Phaseolus vulgaris
Phvul.011G113300 0.5kb downstream 0.5kb downstream 500 false Chr11: 15078228-15078727 Phaseolus vulgaris
Phvul.011G113300 1.0kb upstream 1.0kb upstream 5212 true Chr11: 15078728-15083939 Phaseolus vulgaris
Phvul.011G113300 1.0kb upstream 1.0kb upstream 1000 false Chr11: 15082940-15083939 Phaseolus vulgaris
Phvul.011G113300 1.0kb downstream 1.0kb downstream 5212 true Chr11: 15077728-15082939 Phaseolus vulgaris
Phvul.011G113300 1.0kb downstream 1.0kb downstream 1000 false Chr11: 15077728-15078727 Phaseolus vulgaris
Phvul.011G113300 2.0kb upstream 2.0kb upstream 6212 true Chr11: 15078728-15084939 Phaseolus vulgaris
Phvul.011G113300 2.0kb upstream 2.0kb upstream 2000 false Chr11: 15082940-15084939 Phaseolus vulgaris
Phvul.011G113300 2.0kb downstream 2.0kb downstream 6212 true Chr11: 15076728-15082939 Phaseolus vulgaris
Phvul.011G113300 2.0kb downstream 2.0kb downstream 2000 false Chr11: 15076728-15078727 Phaseolus vulgaris
Phvul.011G113300 5.0kb upstream 5.0kb upstream 9212 true Chr11: 15078728-15087939 Phaseolus vulgaris
Phvul.011G113300 5.0kb upstream 5.0kb upstream 5000 false Chr11: 15082940-15087939 Phaseolus vulgaris
Phvul.011G113300 5.0kb downstream 5.0kb downstream 9212 true Chr11: 15073728-15082939 Phaseolus vulgaris
Phvul.011G113300 5.0kb downstream 5.0kb downstream 5000 false Chr11: 15073728-15078727 Phaseolus vulgaris
Phvul.011G113300 10.0kb upstream 10.0kb upstream 14212 true Chr11: 15078728-15092939 Phaseolus vulgaris
Phvul.011G113300 10.0kb upstream 10.0kb upstream 10000 false Chr11: 15082940-15092939 Phaseolus vulgaris
Phvul.011G113300 10.0kb downstream 10.0kb downstream 14212 true Chr11: 15068728-15082939 Phaseolus vulgaris
Phvul.011G113300 10.0kb downstream 10.0kb downstream 10000 false Chr11: 15068728-15078727 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027541 5273 Angiosperm View MSA
122299575 5265 Fabidae View MSA
124064580 5270 Rosid View MSA
123739469 5271 Pentapetalae View MSA
122786449 5272 Eudicot View MSA
121350683 5274 Embryophyte View MSA
123426661 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.2632 0.0 29.6496   Low
cufflinks 22.2044 0.0 57.3957    
cufflinks 11.5087 0.0 30.2432   Low
cufflinks 11.7522 0.0 31.0881   Low
cufflinks 22.6676 0.0 58.5915    
cufflinks 22.4208 0.0 57.9576    
cufflinks 17.8524 0.0 46.2218    
cufflinks 26.6216 0.0 69.002    
cufflinks 11.5806 0.0 30.5397   Low
cufflinks 30.1454 0.0 78.3322   High
cufflinks 30.1518 0.0 78.2404   High

0 Strain