Gene : Phvul.011G113400 P. vulgaris v2.1
Defline:  (1 of 2) PTHR31343:SF3 - GB Genomic Order:  1141
Name:  ? Phvul.011G113400 Secondary Identifier:  ? PAC:37155835
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.011G113400 0.5kb upstream 0.5kb upstream 4711 true Chr11: 15203870-15208580 Phaseolus vulgaris
Phvul.011G113400 0.5kb upstream 0.5kb upstream 500 false Chr11: 15203870-15204369 Phaseolus vulgaris
Phvul.011G113400 0.5kb downstream 0.5kb downstream 4711 true Chr11: 15204370-15209080 Phaseolus vulgaris
Phvul.011G113400 0.5kb downstream 0.5kb downstream 500 false Chr11: 15208581-15209080 Phaseolus vulgaris
Phvul.011G113400 1.0kb upstream 1.0kb upstream 5211 true Chr11: 15203370-15208580 Phaseolus vulgaris
Phvul.011G113400 1.0kb upstream 1.0kb upstream 1000 false Chr11: 15203370-15204369 Phaseolus vulgaris
Phvul.011G113400 1.0kb downstream 1.0kb downstream 5211 true Chr11: 15204370-15209580 Phaseolus vulgaris
Phvul.011G113400 1.0kb downstream 1.0kb downstream 1000 false Chr11: 15208581-15209580 Phaseolus vulgaris
Phvul.011G113400 2.0kb upstream 2.0kb upstream 6211 true Chr11: 15202370-15208580 Phaseolus vulgaris
Phvul.011G113400 2.0kb upstream 2.0kb upstream 2000 false Chr11: 15202370-15204369 Phaseolus vulgaris
Phvul.011G113400 2.0kb downstream 2.0kb downstream 6211 true Chr11: 15204370-15210580 Phaseolus vulgaris
Phvul.011G113400 2.0kb downstream 2.0kb downstream 2000 false Chr11: 15208581-15210580 Phaseolus vulgaris
Phvul.011G113400 5.0kb upstream 5.0kb upstream 9211 true Chr11: 15199370-15208580 Phaseolus vulgaris
Phvul.011G113400 5.0kb upstream 5.0kb upstream 5000 false Chr11: 15199370-15204369 Phaseolus vulgaris
Phvul.011G113400 5.0kb downstream 5.0kb downstream 9211 true Chr11: 15204370-15213580 Phaseolus vulgaris
Phvul.011G113400 5.0kb downstream 5.0kb downstream 5000 false Chr11: 15208581-15213580 Phaseolus vulgaris
Phvul.011G113400 10.0kb upstream 10.0kb upstream 14211 true Chr11: 15194370-15208580 Phaseolus vulgaris
Phvul.011G113400 10.0kb upstream 10.0kb upstream 10000 false Chr11: 15194370-15204369 Phaseolus vulgaris
Phvul.011G113400 10.0kb downstream 10.0kb downstream 14211 true Chr11: 15204370-15218580 Phaseolus vulgaris
Phvul.011G113400 10.0kb downstream 10.0kb downstream 10000 false Chr11: 15208581-15218580 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314759 5265 Fabidae View MSA
124067567 5270 Rosid View MSA
123743761 5271 Pentapetalae View MSA
122791281 5272 Eudicot View MSA
122049858 5273 Angiosperm View MSA
121311619 5274 Embryophyte View MSA
123425809 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.904 0.0 33.9083    
cufflinks 22.8353 0.0 59.0302   High
cufflinks 5.28974 0.0 14.9049    
cufflinks 20.6797 0.0 53.5611   High
cufflinks 8.80621 0.0 23.8887    
cufflinks 2.38316 0.0 7.35464   Low
cufflinks 5.91171 0.0 16.5328    
cufflinks 7.01474 0.0 19.2538    
cufflinks 6.64647 0.0 18.4676    
cufflinks 22.2541 0.0 57.5402   High
cufflinks 5.28094 0.0 14.9883    

0 Strain