Gene : Phvul.011G116300 P. vulgaris v2.1
Defline:  (1 of 1) PTHR23115:SF14 - ELONGATION FACTOR FAMILY PROTEIN Genomic Order:  1175
Name:  ? Phvul.011G116300 Secondary Identifier:  ? PAC:37155669
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.011G116300 0.5kb upstream 0.5kb upstream 13439 true Chr11: 17734084-17747522 Phaseolus vulgaris
Phvul.011G116300 0.5kb upstream 0.5kb upstream 500 false Chr11: 17734084-17734583 Phaseolus vulgaris
Phvul.011G116300 0.5kb downstream 0.5kb downstream 13439 true Chr11: 17734584-17748022 Phaseolus vulgaris
Phvul.011G116300 0.5kb downstream 0.5kb downstream 500 false Chr11: 17747523-17748022 Phaseolus vulgaris
Phvul.011G116300 1.0kb upstream 1.0kb upstream 13939 true Chr11: 17733584-17747522 Phaseolus vulgaris
Phvul.011G116300 1.0kb upstream 1.0kb upstream 1000 false Chr11: 17733584-17734583 Phaseolus vulgaris
Phvul.011G116300 1.0kb downstream 1.0kb downstream 13939 true Chr11: 17734584-17748522 Phaseolus vulgaris
Phvul.011G116300 1.0kb downstream 1.0kb downstream 1000 false Chr11: 17747523-17748522 Phaseolus vulgaris
Phvul.011G116300 2.0kb upstream 2.0kb upstream 14939 true Chr11: 17732584-17747522 Phaseolus vulgaris
Phvul.011G116300 2.0kb upstream 2.0kb upstream 2000 false Chr11: 17732584-17734583 Phaseolus vulgaris
Phvul.011G116300 2.0kb downstream 2.0kb downstream 14939 true Chr11: 17734584-17749522 Phaseolus vulgaris
Phvul.011G116300 2.0kb downstream 2.0kb downstream 2000 false Chr11: 17747523-17749522 Phaseolus vulgaris
Phvul.011G116300 5.0kb upstream 5.0kb upstream 17939 true Chr11: 17729584-17747522 Phaseolus vulgaris
Phvul.011G116300 5.0kb upstream 5.0kb upstream 5000 false Chr11: 17729584-17734583 Phaseolus vulgaris
Phvul.011G116300 5.0kb downstream 5.0kb downstream 17939 true Chr11: 17734584-17752522 Phaseolus vulgaris
Phvul.011G116300 5.0kb downstream 5.0kb downstream 5000 false Chr11: 17747523-17752522 Phaseolus vulgaris
Phvul.011G116300 10.0kb upstream 10.0kb upstream 22939 true Chr11: 17724584-17747522 Phaseolus vulgaris
Phvul.011G116300 10.0kb upstream 10.0kb upstream 10000 false Chr11: 17724584-17734583 Phaseolus vulgaris
Phvul.011G116300 10.0kb downstream 10.0kb downstream 22939 true Chr11: 17734584-17757522 Phaseolus vulgaris
Phvul.011G116300 10.0kb downstream 10.0kb downstream 10000 false Chr11: 17747523-17757522 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300054 5265 Fabidae View MSA
124067913 5270 Rosid View MSA
123740799 5271 Pentapetalae View MSA
122792956 5272 Eudicot View MSA
122047839 5273 Angiosperm View MSA
121347547 5274 Embryophyte View MSA
123425076 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.21807 0.0 19.2168   Low
cufflinks 12.0195 0.0 31.2049    
cufflinks 10.8901 0.0 28.3539    
cufflinks 13.9373 0.0 36.0937    
cufflinks 9.95619 0.0 26.0402    
cufflinks 8.44037 0.0 22.2631   Low
cufflinks 12.4004 0.0 32.1472    
cufflinks 13.7278 0.0 35.5255    
cufflinks 13.2322 0.0 34.2766    
cufflinks 17.9363 0.0 46.3747   High
cufflinks 11.4733 0.0 29.8352    

0 Strain