Gene : Phvul.011G116100 P. vulgaris v2.1
Defline:  (1 of 1) PTHR24073:SF551 - RAS-RELATED PROTEIN RABA1I Genomic Order:  1176
Name:  ? Phvul.011G116100 Secondary Identifier:  ? PAC:37156596
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.011G116100 0.5kb upstream 0.5kb upstream 4069 true Chr11: 17822257-17826325 Phaseolus vulgaris
Phvul.011G116100 0.5kb upstream 0.5kb upstream 500 false Chr11: 17822257-17822756 Phaseolus vulgaris
Phvul.011G116100 0.5kb downstream 0.5kb downstream 4069 true Chr11: 17822757-17826825 Phaseolus vulgaris
Phvul.011G116100 0.5kb downstream 0.5kb downstream 500 false Chr11: 17826326-17826825 Phaseolus vulgaris
Phvul.011G116100 1.0kb upstream 1.0kb upstream 4569 true Chr11: 17821757-17826325 Phaseolus vulgaris
Phvul.011G116100 1.0kb upstream 1.0kb upstream 1000 false Chr11: 17821757-17822756 Phaseolus vulgaris
Phvul.011G116100 1.0kb downstream 1.0kb downstream 4569 true Chr11: 17822757-17827325 Phaseolus vulgaris
Phvul.011G116100 1.0kb downstream 1.0kb downstream 1000 false Chr11: 17826326-17827325 Phaseolus vulgaris
Phvul.011G116100 2.0kb upstream 2.0kb upstream 5569 true Chr11: 17820757-17826325 Phaseolus vulgaris
Phvul.011G116100 2.0kb upstream 2.0kb upstream 2000 false Chr11: 17820757-17822756 Phaseolus vulgaris
Phvul.011G116100 2.0kb downstream 2.0kb downstream 5569 true Chr11: 17822757-17828325 Phaseolus vulgaris
Phvul.011G116100 2.0kb downstream 2.0kb downstream 2000 false Chr11: 17826326-17828325 Phaseolus vulgaris
Phvul.011G116100 5.0kb upstream 5.0kb upstream 8569 true Chr11: 17817757-17826325 Phaseolus vulgaris
Phvul.011G116100 5.0kb upstream 5.0kb upstream 5000 false Chr11: 17817757-17822756 Phaseolus vulgaris
Phvul.011G116100 5.0kb downstream 5.0kb downstream 8569 true Chr11: 17822757-17831325 Phaseolus vulgaris
Phvul.011G116100 5.0kb downstream 5.0kb downstream 5000 false Chr11: 17826326-17831325 Phaseolus vulgaris
Phvul.011G116100 10.0kb upstream 10.0kb upstream 13569 true Chr11: 17812757-17826325 Phaseolus vulgaris
Phvul.011G116100 10.0kb upstream 10.0kb upstream 10000 false Chr11: 17812757-17822756 Phaseolus vulgaris
Phvul.011G116100 10.0kb downstream 10.0kb downstream 13569 true Chr11: 17822757-17836325 Phaseolus vulgaris
Phvul.011G116100 10.0kb downstream 10.0kb downstream 10000 false Chr11: 17826326-17836325 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314290 5265 Fabidae View MSA
124074374 5270 Rosid View MSA
123750734 5271 Pentapetalae View MSA
122796076 5272 Eudicot View MSA
122042184 5273 Angiosperm View MSA
121351595 5274 Embryophyte View MSA
123426852 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.6028 0.0 31.6704    
cufflinks 10.4014 0.0 28.6252    
cufflinks 7.8756 0.0 22.2606   Low
cufflinks 15.5367 0.0 41.4711   High
cufflinks 10.4095 0.0 28.8223    
cufflinks 10.6523 0.0 29.2483    
cufflinks 8.19419 0.0 22.9696   Low
cufflinks 11.0933 0.0 30.2843    
cufflinks 11.6366 0.0 31.6434    
cufflinks 12.7982 0.0 34.6644    
cufflinks 14.29 0.0 38.3738   High

0 Strain