Gene : Phvul.011G117300 P. vulgaris v2.1
Defline:  (1 of 1) PTHR19282:SF158 - TETRASPANIN-19 Genomic Order:  1166
Name:  ? Phvul.011G117300 Secondary Identifier:  ? PAC:37157280
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.011G117300 0.5kb upstream 0.5kb upstream 4267 true Chr11: 17303724-17307990 Phaseolus vulgaris
Phvul.011G117300 0.5kb upstream 0.5kb upstream 500 false Chr11: 17307491-17307990 Phaseolus vulgaris
Phvul.011G117300 0.5kb downstream 0.5kb downstream 4267 true Chr11: 17303224-17307490 Phaseolus vulgaris
Phvul.011G117300 0.5kb downstream 0.5kb downstream 500 false Chr11: 17303224-17303723 Phaseolus vulgaris
Phvul.011G117300 1.0kb upstream 1.0kb upstream 4767 true Chr11: 17303724-17308490 Phaseolus vulgaris
Phvul.011G117300 1.0kb upstream 1.0kb upstream 1000 false Chr11: 17307491-17308490 Phaseolus vulgaris
Phvul.011G117300 1.0kb downstream 1.0kb downstream 4767 true Chr11: 17302724-17307490 Phaseolus vulgaris
Phvul.011G117300 1.0kb downstream 1.0kb downstream 1000 false Chr11: 17302724-17303723 Phaseolus vulgaris
Phvul.011G117300 2.0kb upstream 2.0kb upstream 5767 true Chr11: 17303724-17309490 Phaseolus vulgaris
Phvul.011G117300 2.0kb upstream 2.0kb upstream 2000 false Chr11: 17307491-17309490 Phaseolus vulgaris
Phvul.011G117300 2.0kb downstream 2.0kb downstream 5767 true Chr11: 17301724-17307490 Phaseolus vulgaris
Phvul.011G117300 2.0kb downstream 2.0kb downstream 2000 false Chr11: 17301724-17303723 Phaseolus vulgaris
Phvul.011G117300 5.0kb upstream 5.0kb upstream 8767 true Chr11: 17303724-17312490 Phaseolus vulgaris
Phvul.011G117300 5.0kb upstream 5.0kb upstream 5000 false Chr11: 17307491-17312490 Phaseolus vulgaris
Phvul.011G117300 5.0kb downstream 5.0kb downstream 8767 true Chr11: 17298724-17307490 Phaseolus vulgaris
Phvul.011G117300 5.0kb downstream 5.0kb downstream 5000 false Chr11: 17298724-17303723 Phaseolus vulgaris
Phvul.011G117300 10.0kb upstream 10.0kb upstream 13767 true Chr11: 17303724-17317490 Phaseolus vulgaris
Phvul.011G117300 10.0kb upstream 10.0kb upstream 10000 false Chr11: 17307491-17317490 Phaseolus vulgaris
Phvul.011G117300 10.0kb downstream 10.0kb downstream 13767 true Chr11: 17293724-17307490 Phaseolus vulgaris
Phvul.011G117300 10.0kb downstream 10.0kb downstream 10000 false Chr11: 17293724-17303723 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041111 5273 Angiosperm View MSA
122307421 5265 Fabidae View MSA
124072815 5270 Rosid View MSA
123745432 5271 Pentapetalae View MSA
122787617 5272 Eudicot View MSA
121351335 5274 Embryophyte View MSA
123424447 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 50.0515 0.0 162.764 High High
cufflinks 30.1014 0.0 99.2917    
cufflinks 33.7691 0.0 109.921    
cufflinks 44.4167 0.0 144.112 High  
cufflinks 39.5102 0.0 128.665 High  
cufflinks 21.882 0.0 75.0191   Low
cufflinks 28.5144 0.0 93.7734 High  
cufflinks 27.0692 0.0 91.4176    
cufflinks 33.6015 0.0 109.732 High  
cufflinks 43.934 0.0 142.413 High  
cufflinks 39.4521 0.0 127.66 High  

0 Strain