Gene : Phvul.011G115600 P. vulgaris v2.1
Genomic Order:  1218 Name:  ? Phvul.011G115600
Secondary Identifier:  ? PAC:37156222
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.011G115600 0.5kb upstream 0.5kb upstream 4084 true Chr11: 23735029-23739112 Phaseolus vulgaris
Phvul.011G115600 0.5kb upstream 0.5kb upstream 500 false Chr11: 23738613-23739112 Phaseolus vulgaris
Phvul.011G115600 0.5kb downstream 0.5kb downstream 4084 true Chr11: 23734529-23738612 Phaseolus vulgaris
Phvul.011G115600 0.5kb downstream 0.5kb downstream 500 false Chr11: 23734529-23735028 Phaseolus vulgaris
Phvul.011G115600 1.0kb upstream 1.0kb upstream 4584 true Chr11: 23735029-23739612 Phaseolus vulgaris
Phvul.011G115600 1.0kb upstream 1.0kb upstream 1000 false Chr11: 23738613-23739612 Phaseolus vulgaris
Phvul.011G115600 1.0kb downstream 1.0kb downstream 4584 true Chr11: 23734029-23738612 Phaseolus vulgaris
Phvul.011G115600 1.0kb downstream 1.0kb downstream 1000 false Chr11: 23734029-23735028 Phaseolus vulgaris
Phvul.011G115600 2.0kb upstream 2.0kb upstream 5584 true Chr11: 23735029-23740612 Phaseolus vulgaris
Phvul.011G115600 2.0kb upstream 2.0kb upstream 2000 false Chr11: 23738613-23740612 Phaseolus vulgaris
Phvul.011G115600 2.0kb downstream 2.0kb downstream 5584 true Chr11: 23733029-23738612 Phaseolus vulgaris
Phvul.011G115600 2.0kb downstream 2.0kb downstream 2000 false Chr11: 23733029-23735028 Phaseolus vulgaris
Phvul.011G115600 5.0kb upstream 5.0kb upstream 8584 true Chr11: 23735029-23743612 Phaseolus vulgaris
Phvul.011G115600 5.0kb upstream 5.0kb upstream 5000 false Chr11: 23738613-23743612 Phaseolus vulgaris
Phvul.011G115600 5.0kb downstream 5.0kb downstream 8584 true Chr11: 23730029-23738612 Phaseolus vulgaris
Phvul.011G115600 5.0kb downstream 5.0kb downstream 5000 false Chr11: 23730029-23735028 Phaseolus vulgaris
Phvul.011G115600 10.0kb upstream 10.0kb upstream 13584 true Chr11: 23735029-23748612 Phaseolus vulgaris
Phvul.011G115600 10.0kb upstream 10.0kb upstream 10000 false Chr11: 23738613-23748612 Phaseolus vulgaris
Phvul.011G115600 10.0kb downstream 10.0kb downstream 13584 true Chr11: 23725029-23738612 Phaseolus vulgaris
Phvul.011G115600 10.0kb downstream 10.0kb downstream 10000 false Chr11: 23725029-23735028 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297737 5265 Fabidae View MSA
124075057 5270 Rosid View MSA
123754027 5271 Pentapetalae View MSA
122797844 5272 Eudicot View MSA
122043421 5273 Angiosperm View MSA
121348934 5274 Embryophyte View MSA
123381085 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.63528 0.0 24.3858    
cufflinks 7.87282 0.0 35.8711    
cufflinks 4.81083 0.0 21.337   Low
cufflinks 4.24242 0.0 17.3738   Low
cufflinks 7.02655 0.0 32.4165    
cufflinks 5.8845 0.0 22.1977    
cufflinks 7.81959 0.0 30.7772    
cufflinks 7.68267 0.0 33.2382    
cufflinks 6.40289 0.0 26.7601    
cufflinks 9.93796 0.0 34.0258   High
cufflinks 7.83815 0.0 31.4769    

0 Strain