Gene : Phvul.011G118100 P. vulgaris v2.1
Defline:  (1 of 9) PTHR11746//PTHR11746:SF83 - O-METHYLTRANSFERASE // SUBFAMILY NOT NAMED Genomic Order:  1198
Name:  ? Phvul.011G118100 Secondary Identifier:  ? PAC:37156953
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.011G118100 0.5kb upstream 0.5kb upstream 1939 true Chr11: 19477932-19479870 Phaseolus vulgaris
Phvul.011G118100 0.5kb upstream 0.5kb upstream 500 false Chr11: 19477932-19478431 Phaseolus vulgaris
Phvul.011G118100 0.5kb downstream 0.5kb downstream 1939 true Chr11: 19478432-19480370 Phaseolus vulgaris
Phvul.011G118100 0.5kb downstream 0.5kb downstream 500 false Chr11: 19479871-19480370 Phaseolus vulgaris
Phvul.011G118100 1.0kb upstream 1.0kb upstream 2439 true Chr11: 19477432-19479870 Phaseolus vulgaris
Phvul.011G118100 1.0kb upstream 1.0kb upstream 1000 false Chr11: 19477432-19478431 Phaseolus vulgaris
Phvul.011G118100 1.0kb downstream 1.0kb downstream 2439 true Chr11: 19478432-19480870 Phaseolus vulgaris
Phvul.011G118100 1.0kb downstream 1.0kb downstream 1000 false Chr11: 19479871-19480870 Phaseolus vulgaris
Phvul.011G118100 2.0kb upstream 2.0kb upstream 3439 true Chr11: 19476432-19479870 Phaseolus vulgaris
Phvul.011G118100 2.0kb upstream 2.0kb upstream 2000 false Chr11: 19476432-19478431 Phaseolus vulgaris
Phvul.011G118100 2.0kb downstream 2.0kb downstream 3439 true Chr11: 19478432-19481870 Phaseolus vulgaris
Phvul.011G118100 2.0kb downstream 2.0kb downstream 2000 false Chr11: 19479871-19481870 Phaseolus vulgaris
Phvul.011G118100 5.0kb upstream 5.0kb upstream 6439 true Chr11: 19473432-19479870 Phaseolus vulgaris
Phvul.011G118100 5.0kb upstream 5.0kb upstream 5000 false Chr11: 19473432-19478431 Phaseolus vulgaris
Phvul.011G118100 5.0kb downstream 5.0kb downstream 6439 true Chr11: 19478432-19484870 Phaseolus vulgaris
Phvul.011G118100 5.0kb downstream 5.0kb downstream 5000 false Chr11: 19479871-19484870 Phaseolus vulgaris
Phvul.011G118100 10.0kb upstream 10.0kb upstream 11439 true Chr11: 19468432-19479870 Phaseolus vulgaris
Phvul.011G118100 10.0kb upstream 10.0kb upstream 10000 false Chr11: 19468432-19478431 Phaseolus vulgaris
Phvul.011G118100 10.0kb downstream 10.0kb downstream 11439 true Chr11: 19478432-19489870 Phaseolus vulgaris
Phvul.011G118100 10.0kb downstream 10.0kb downstream 10000 false Chr11: 19479871-19489870 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314329 5265 Fabidae View MSA
124071717 5270 Rosid View MSA
123750281 5271 Pentapetalae View MSA
122794018 5272 Eudicot View MSA
122050650 5273 Angiosperm View MSA
123429068 5275 Viridiplantae View MSA
121350689 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.811698 0.0 2.98446   Low
cufflinks 5.97735 0.0 17.7019    
cufflinks 4.7226 0.0 14.3452    
cufflinks 5.27037 0.0 15.9784    
cufflinks 4.5273 0.0 13.9345    
cufflinks 11.8184 0.0 32.673   High
cufflinks 2.34126 0.0 7.71493    
cufflinks 1.09682 0.0 3.9163   Low
cufflinks 1.7446 0.0 5.95817    
cufflinks 6.38012 0.0 18.7925    
cufflinks 4.8735 0.0 14.8635    

0 Strain