Gene : Phvul.011G117900 P. vulgaris v2.1
Defline:  (1 of 4) PTHR10992//PTHR10992:SF869 - ALPHA/BETA HYDROLASE FOLD-CONTAINING PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  1200
Name:  ? Phvul.011G117900 Secondary Identifier:  ? PAC:37156872
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.011G117900 0.5kb upstream 0.5kb upstream 3029 true Chr11: 19747460-19750488 Phaseolus vulgaris
Phvul.011G117900 0.5kb upstream 0.5kb upstream 500 false Chr11: 19747460-19747959 Phaseolus vulgaris
Phvul.011G117900 0.5kb downstream 0.5kb downstream 3029 true Chr11: 19747960-19750988 Phaseolus vulgaris
Phvul.011G117900 0.5kb downstream 0.5kb downstream 500 false Chr11: 19750489-19750988 Phaseolus vulgaris
Phvul.011G117900 1.0kb upstream 1.0kb upstream 3529 true Chr11: 19746960-19750488 Phaseolus vulgaris
Phvul.011G117900 1.0kb upstream 1.0kb upstream 1000 false Chr11: 19746960-19747959 Phaseolus vulgaris
Phvul.011G117900 1.0kb downstream 1.0kb downstream 3529 true Chr11: 19747960-19751488 Phaseolus vulgaris
Phvul.011G117900 1.0kb downstream 1.0kb downstream 1000 false Chr11: 19750489-19751488 Phaseolus vulgaris
Phvul.011G117900 2.0kb upstream 2.0kb upstream 4529 true Chr11: 19745960-19750488 Phaseolus vulgaris
Phvul.011G117900 2.0kb upstream 2.0kb upstream 2000 false Chr11: 19745960-19747959 Phaseolus vulgaris
Phvul.011G117900 2.0kb downstream 2.0kb downstream 4529 true Chr11: 19747960-19752488 Phaseolus vulgaris
Phvul.011G117900 2.0kb downstream 2.0kb downstream 2000 false Chr11: 19750489-19752488 Phaseolus vulgaris
Phvul.011G117900 5.0kb upstream 5.0kb upstream 7529 true Chr11: 19742960-19750488 Phaseolus vulgaris
Phvul.011G117900 5.0kb upstream 5.0kb upstream 5000 false Chr11: 19742960-19747959 Phaseolus vulgaris
Phvul.011G117900 5.0kb downstream 5.0kb downstream 7529 true Chr11: 19747960-19755488 Phaseolus vulgaris
Phvul.011G117900 5.0kb downstream 5.0kb downstream 5000 false Chr11: 19750489-19755488 Phaseolus vulgaris
Phvul.011G117900 10.0kb upstream 10.0kb upstream 12529 true Chr11: 19737960-19750488 Phaseolus vulgaris
Phvul.011G117900 10.0kb upstream 10.0kb upstream 10000 false Chr11: 19737960-19747959 Phaseolus vulgaris
Phvul.011G117900 10.0kb downstream 10.0kb downstream 12529 true Chr11: 19747960-19760488 Phaseolus vulgaris
Phvul.011G117900 10.0kb downstream 10.0kb downstream 10000 false Chr11: 19750489-19760488 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310713 5265 Fabidae View MSA
124069976 5270 Rosid View MSA
123753681 5271 Pentapetalae View MSA
122797567 5272 Eudicot View MSA
122048317 5273 Angiosperm View MSA
121350618 5274 Embryophyte View MSA
123428460 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.82459 0.0 21.7028    
cufflinks 11.8954 0.0 31.8445    
cufflinks 0.356727 0.0 1.3587 Low Low
cufflinks 11.2546 0.0 30.4075    
cufflinks 2.42911 0.0 7.69542    
cufflinks 1.27647 0.0 4.31209   Low
cufflinks 26.9072 0.0 69.5555    
cufflinks 36.7085 0.0 95.3089 High  
cufflinks 34.923 0.0 90.4185 High  
cufflinks 134.02 0.0 383.92 High High
cufflinks 3.12103 0.0 9.59454    

0 Strain