Gene : Phvul.011G100500 P. vulgaris v2.1
Defline:  (1 of 1) K10754 - replication factor C subunit 1 (RFC1) Genomic Order:  1007
Name:  ? Phvul.011G100500 Secondary Identifier:  ? PAC:37157434
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.011G100500 0.5kb upstream 0.5kb upstream 11640 true Chr11: 10797312-10808951 Phaseolus vulgaris
Phvul.011G100500 0.5kb upstream 0.5kb upstream 500 false Chr11: 10797312-10797811 Phaseolus vulgaris
Phvul.011G100500 0.5kb downstream 0.5kb downstream 11640 true Chr11: 10797812-10809451 Phaseolus vulgaris
Phvul.011G100500 0.5kb downstream 0.5kb downstream 500 false Chr11: 10808952-10809451 Phaseolus vulgaris
Phvul.011G100500 1.0kb upstream 1.0kb upstream 12140 true Chr11: 10796812-10808951 Phaseolus vulgaris
Phvul.011G100500 1.0kb upstream 1.0kb upstream 1000 false Chr11: 10796812-10797811 Phaseolus vulgaris
Phvul.011G100500 1.0kb downstream 1.0kb downstream 12140 true Chr11: 10797812-10809951 Phaseolus vulgaris
Phvul.011G100500 1.0kb downstream 1.0kb downstream 1000 false Chr11: 10808952-10809951 Phaseolus vulgaris
Phvul.011G100500 2.0kb upstream 2.0kb upstream 13140 true Chr11: 10795812-10808951 Phaseolus vulgaris
Phvul.011G100500 2.0kb upstream 2.0kb upstream 2000 false Chr11: 10795812-10797811 Phaseolus vulgaris
Phvul.011G100500 2.0kb downstream 2.0kb downstream 13140 true Chr11: 10797812-10810951 Phaseolus vulgaris
Phvul.011G100500 2.0kb downstream 2.0kb downstream 2000 false Chr11: 10808952-10810951 Phaseolus vulgaris
Phvul.011G100500 5.0kb upstream 5.0kb upstream 16140 true Chr11: 10792812-10808951 Phaseolus vulgaris
Phvul.011G100500 5.0kb upstream 5.0kb upstream 5000 false Chr11: 10792812-10797811 Phaseolus vulgaris
Phvul.011G100500 5.0kb downstream 5.0kb downstream 16140 true Chr11: 10797812-10813951 Phaseolus vulgaris
Phvul.011G100500 5.0kb downstream 5.0kb downstream 5000 false Chr11: 10808952-10813951 Phaseolus vulgaris
Phvul.011G100500 10.0kb upstream 10.0kb upstream 21140 true Chr11: 10787812-10808951 Phaseolus vulgaris
Phvul.011G100500 10.0kb upstream 10.0kb upstream 10000 false Chr11: 10787812-10797811 Phaseolus vulgaris
Phvul.011G100500 10.0kb downstream 10.0kb downstream 21140 true Chr11: 10797812-10818951 Phaseolus vulgaris
Phvul.011G100500 10.0kb downstream 10.0kb downstream 10000 false Chr11: 10808952-10818951 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041518 5273 Angiosperm View MSA
122308104 5265 Fabidae View MSA
124066049 5270 Rosid View MSA
123746949 5271 Pentapetalae View MSA
122789448 5272 Eudicot View MSA
121345302 5274 Embryophyte View MSA
123425414 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.04872 0.0 5.93299   Low
cufflinks 7.55053 0.0 19.6955    
cufflinks 4.09961 0.0 11.1255    
cufflinks 1.96494 0.0 5.79033   Low
cufflinks 5.52328 0.0 14.7545    
cufflinks 6.84198 0.0 17.9165    
cufflinks 6.46494 0.0 16.9633    
cufflinks 7.25656 0.0 18.9029    
cufflinks 4.58929 0.0 12.3441    
cufflinks 7.43712 0.0 19.4256    
cufflinks 5.50542 0.0 14.6634    

0 Strain