Gene : Phvul.011G100450 P. vulgaris v2.1
Defline:  (1 of 4) PTHR21495//PTHR21495:SF78 - NUCLEOPORIN-RELATED // SUBFAMILY NOT NAMED Genomic Order:  1026
Name:  ? Phvul.011G100450 Secondary Identifier:  ? PAC:37155285
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.011G100450 0.5kb upstream 0.5kb upstream 1055 true Chr11: 11131483-11132537 Phaseolus vulgaris
Phvul.011G100450 0.5kb upstream 0.5kb upstream 500 false Chr11: 11132038-11132537 Phaseolus vulgaris
Phvul.011G100450 0.5kb downstream 0.5kb downstream 1055 true Chr11: 11130983-11132037 Phaseolus vulgaris
Phvul.011G100450 0.5kb downstream 0.5kb downstream 500 false Chr11: 11130983-11131482 Phaseolus vulgaris
Phvul.011G100450 1.0kb upstream 1.0kb upstream 1555 true Chr11: 11131483-11133037 Phaseolus vulgaris
Phvul.011G100450 1.0kb upstream 1.0kb upstream 1000 false Chr11: 11132038-11133037 Phaseolus vulgaris
Phvul.011G100450 1.0kb downstream 1.0kb downstream 1555 true Chr11: 11130483-11132037 Phaseolus vulgaris
Phvul.011G100450 1.0kb downstream 1.0kb downstream 1000 false Chr11: 11130483-11131482 Phaseolus vulgaris
Phvul.011G100450 2.0kb upstream 2.0kb upstream 2555 true Chr11: 11131483-11134037 Phaseolus vulgaris
Phvul.011G100450 2.0kb upstream 2.0kb upstream 2000 false Chr11: 11132038-11134037 Phaseolus vulgaris
Phvul.011G100450 2.0kb downstream 2.0kb downstream 2555 true Chr11: 11129483-11132037 Phaseolus vulgaris
Phvul.011G100450 2.0kb downstream 2.0kb downstream 2000 false Chr11: 11129483-11131482 Phaseolus vulgaris
Phvul.011G100450 5.0kb upstream 5.0kb upstream 5555 true Chr11: 11131483-11137037 Phaseolus vulgaris
Phvul.011G100450 5.0kb upstream 5.0kb upstream 5000 false Chr11: 11132038-11137037 Phaseolus vulgaris
Phvul.011G100450 5.0kb downstream 5.0kb downstream 5555 true Chr11: 11126483-11132037 Phaseolus vulgaris
Phvul.011G100450 5.0kb downstream 5.0kb downstream 5000 false Chr11: 11126483-11131482 Phaseolus vulgaris
Phvul.011G100450 10.0kb upstream 10.0kb upstream 10555 true Chr11: 11131483-11142037 Phaseolus vulgaris
Phvul.011G100450 10.0kb upstream 10.0kb upstream 10000 false Chr11: 11132038-11142037 Phaseolus vulgaris
Phvul.011G100450 10.0kb downstream 10.0kb downstream 10555 true Chr11: 11121483-11132037 Phaseolus vulgaris
Phvul.011G100450 10.0kb downstream 10.0kb downstream 10000 false Chr11: 11121483-11131482 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121779389 5273 Angiosperm View MSA
122314276 5265 Fabidae View MSA
124069736 5270 Rosid View MSA
123742633 5271 Pentapetalae View MSA
122770334 5272 Eudicot View MSA
121351582 5274 Embryophyte View MSA
123382236 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 2.36307 0.0 8.70489    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0490499 0.0 0.260544 Low  

0 Strain