Gene : Phvul.011G103400 P. vulgaris v2.1
Defline:  (1 of 5) PTHR11214:SF5 - BETA-1,3-GALACTOSYLTRANSFERASE 2-RELATED Genomic Order:  1040
Name:  ? Phvul.011G103400 Secondary Identifier:  ? PAC:37157128
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.011G103400 0.5kb upstream 0.5kb upstream 5456 true Chr11: 11558183-11563638 Phaseolus vulgaris
Phvul.011G103400 0.5kb upstream 0.5kb upstream 500 false Chr11: 11563139-11563638 Phaseolus vulgaris
Phvul.011G103400 0.5kb downstream 0.5kb downstream 5456 true Chr11: 11557683-11563138 Phaseolus vulgaris
Phvul.011G103400 0.5kb downstream 0.5kb downstream 500 false Chr11: 11557683-11558182 Phaseolus vulgaris
Phvul.011G103400 1.0kb upstream 1.0kb upstream 5956 true Chr11: 11558183-11564138 Phaseolus vulgaris
Phvul.011G103400 1.0kb upstream 1.0kb upstream 1000 false Chr11: 11563139-11564138 Phaseolus vulgaris
Phvul.011G103400 1.0kb downstream 1.0kb downstream 5956 true Chr11: 11557183-11563138 Phaseolus vulgaris
Phvul.011G103400 1.0kb downstream 1.0kb downstream 1000 false Chr11: 11557183-11558182 Phaseolus vulgaris
Phvul.011G103400 2.0kb upstream 2.0kb upstream 6956 true Chr11: 11558183-11565138 Phaseolus vulgaris
Phvul.011G103400 2.0kb upstream 2.0kb upstream 2000 false Chr11: 11563139-11565138 Phaseolus vulgaris
Phvul.011G103400 2.0kb downstream 2.0kb downstream 6956 true Chr11: 11556183-11563138 Phaseolus vulgaris
Phvul.011G103400 2.0kb downstream 2.0kb downstream 2000 false Chr11: 11556183-11558182 Phaseolus vulgaris
Phvul.011G103400 5.0kb upstream 5.0kb upstream 9956 true Chr11: 11558183-11568138 Phaseolus vulgaris
Phvul.011G103400 5.0kb upstream 5.0kb upstream 5000 false Chr11: 11563139-11568138 Phaseolus vulgaris
Phvul.011G103400 5.0kb downstream 5.0kb downstream 9956 true Chr11: 11553183-11563138 Phaseolus vulgaris
Phvul.011G103400 5.0kb downstream 5.0kb downstream 5000 false Chr11: 11553183-11558182 Phaseolus vulgaris
Phvul.011G103400 10.0kb upstream 10.0kb upstream 14956 true Chr11: 11558183-11573138 Phaseolus vulgaris
Phvul.011G103400 10.0kb upstream 10.0kb upstream 10000 false Chr11: 11563139-11573138 Phaseolus vulgaris
Phvul.011G103400 10.0kb downstream 10.0kb downstream 14956 true Chr11: 11548183-11563138 Phaseolus vulgaris
Phvul.011G103400 10.0kb downstream 10.0kb downstream 10000 false Chr11: 11548183-11558182 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309134 5265 Fabidae View MSA
124072370 5270 Rosid View MSA
123747291 5271 Pentapetalae View MSA
122789444 5272 Eudicot View MSA
122042482 5273 Angiosperm View MSA
121348547 5274 Embryophyte View MSA
123427932 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.88803 0.0 23.6305   Low
cufflinks 6.60789 0.0 17.9854   Low
cufflinks 11.2351 0.0 29.3824    
cufflinks 36.269 0.0 94.9935 High High
cufflinks 19.9637 0.0 51.6079    
cufflinks 15.2193 0.0 39.4289    
cufflinks 18.7632 0.0 48.5015    
cufflinks 12.5 0.0 32.5383    
cufflinks 16.7086 0.0 43.2401    
cufflinks 15.4814 0.0 40.1287    
cufflinks 29.8462 0.0 77.625   High

0 Strain