Gene : Phvul.011G104400 P. vulgaris v2.1
Defline:  (1 of 3) PTHR24073:SF515 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MSD21 Genomic Order:  1050
Name:  ? Phvul.011G104400 Secondary Identifier:  ? PAC:37156292
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.011G104400 0.5kb upstream 0.5kb upstream 3427 true Chr11: 11827798-11831224 Phaseolus vulgaris
Phvul.011G104400 0.5kb upstream 0.5kb upstream 500 false Chr11: 11827798-11828297 Phaseolus vulgaris
Phvul.011G104400 0.5kb downstream 0.5kb downstream 3427 true Chr11: 11828298-11831724 Phaseolus vulgaris
Phvul.011G104400 0.5kb downstream 0.5kb downstream 500 false Chr11: 11831225-11831724 Phaseolus vulgaris
Phvul.011G104400 1.0kb upstream 1.0kb upstream 3927 true Chr11: 11827298-11831224 Phaseolus vulgaris
Phvul.011G104400 1.0kb upstream 1.0kb upstream 1000 false Chr11: 11827298-11828297 Phaseolus vulgaris
Phvul.011G104400 1.0kb downstream 1.0kb downstream 3927 true Chr11: 11828298-11832224 Phaseolus vulgaris
Phvul.011G104400 1.0kb downstream 1.0kb downstream 1000 false Chr11: 11831225-11832224 Phaseolus vulgaris
Phvul.011G104400 2.0kb upstream 2.0kb upstream 4927 true Chr11: 11826298-11831224 Phaseolus vulgaris
Phvul.011G104400 2.0kb upstream 2.0kb upstream 2000 false Chr11: 11826298-11828297 Phaseolus vulgaris
Phvul.011G104400 2.0kb downstream 2.0kb downstream 4927 true Chr11: 11828298-11833224 Phaseolus vulgaris
Phvul.011G104400 2.0kb downstream 2.0kb downstream 2000 false Chr11: 11831225-11833224 Phaseolus vulgaris
Phvul.011G104400 5.0kb upstream 5.0kb upstream 7927 true Chr11: 11823298-11831224 Phaseolus vulgaris
Phvul.011G104400 5.0kb upstream 5.0kb upstream 5000 false Chr11: 11823298-11828297 Phaseolus vulgaris
Phvul.011G104400 5.0kb downstream 5.0kb downstream 7927 true Chr11: 11828298-11836224 Phaseolus vulgaris
Phvul.011G104400 5.0kb downstream 5.0kb downstream 5000 false Chr11: 11831225-11836224 Phaseolus vulgaris
Phvul.011G104400 10.0kb upstream 10.0kb upstream 12927 true Chr11: 11818298-11831224 Phaseolus vulgaris
Phvul.011G104400 10.0kb upstream 10.0kb upstream 10000 false Chr11: 11818298-11828297 Phaseolus vulgaris
Phvul.011G104400 10.0kb downstream 10.0kb downstream 12927 true Chr11: 11828298-11841224 Phaseolus vulgaris
Phvul.011G104400 10.0kb downstream 10.0kb downstream 10000 false Chr11: 11831225-11841224 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029161 5273 Angiosperm View MSA
122312700 5265 Fabidae View MSA
124062930 5270 Rosid View MSA
123753329 5271 Pentapetalae View MSA
122789157 5272 Eudicot View MSA
121298542 5274 Embryophyte View MSA
123336508 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.21171 0.0 20.1279   High
cufflinks 2.80867 0.0 8.69383    
cufflinks 1.43337 0.0 4.78499    
cufflinks 5.88684 0.0 16.7909   High
cufflinks 2.11886 0.0 6.79277    
cufflinks 1.1735 0.0 4.00964    
cufflinks 0.874916 0.0 3.06804    
cufflinks 0.535077 0.0 1.96531   Low
cufflinks 0.959442 0.0 3.33756    
cufflinks 2.49315 0.0 7.82506    
cufflinks 1.44629 0.0 4.82855    

0 Strain