Gene : Phvul.011G104100 P. vulgaris v2.1
Genomic Order:  1047 Name:  ? Phvul.011G104100
Secondary Identifier:  ? PAC:37156509
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.011G104100 0.5kb upstream 0.5kb upstream 11174 true Chr11: 11728025-11739198 Phaseolus vulgaris
Phvul.011G104100 0.5kb upstream 0.5kb upstream 500 false Chr11: 11728025-11728524 Phaseolus vulgaris
Phvul.011G104100 0.5kb downstream 0.5kb downstream 11174 true Chr11: 11728525-11739698 Phaseolus vulgaris
Phvul.011G104100 0.5kb downstream 0.5kb downstream 500 false Chr11: 11739199-11739698 Phaseolus vulgaris
Phvul.011G104100 1.0kb upstream 1.0kb upstream 11674 true Chr11: 11727525-11739198 Phaseolus vulgaris
Phvul.011G104100 1.0kb upstream 1.0kb upstream 1000 false Chr11: 11727525-11728524 Phaseolus vulgaris
Phvul.011G104100 1.0kb downstream 1.0kb downstream 11674 true Chr11: 11728525-11740198 Phaseolus vulgaris
Phvul.011G104100 1.0kb downstream 1.0kb downstream 1000 false Chr11: 11739199-11740198 Phaseolus vulgaris
Phvul.011G104100 2.0kb upstream 2.0kb upstream 12674 true Chr11: 11726525-11739198 Phaseolus vulgaris
Phvul.011G104100 2.0kb upstream 2.0kb upstream 2000 false Chr11: 11726525-11728524 Phaseolus vulgaris
Phvul.011G104100 2.0kb downstream 2.0kb downstream 12674 true Chr11: 11728525-11741198 Phaseolus vulgaris
Phvul.011G104100 2.0kb downstream 2.0kb downstream 2000 false Chr11: 11739199-11741198 Phaseolus vulgaris
Phvul.011G104100 5.0kb upstream 5.0kb upstream 15674 true Chr11: 11723525-11739198 Phaseolus vulgaris
Phvul.011G104100 5.0kb upstream 5.0kb upstream 5000 false Chr11: 11723525-11728524 Phaseolus vulgaris
Phvul.011G104100 5.0kb downstream 5.0kb downstream 15674 true Chr11: 11728525-11744198 Phaseolus vulgaris
Phvul.011G104100 5.0kb downstream 5.0kb downstream 5000 false Chr11: 11739199-11744198 Phaseolus vulgaris
Phvul.011G104100 10.0kb upstream 10.0kb upstream 20674 true Chr11: 11718525-11739198 Phaseolus vulgaris
Phvul.011G104100 10.0kb upstream 10.0kb upstream 10000 false Chr11: 11718525-11728524 Phaseolus vulgaris
Phvul.011G104100 10.0kb downstream 10.0kb downstream 20674 true Chr11: 11728525-11749198 Phaseolus vulgaris
Phvul.011G104100 10.0kb downstream 10.0kb downstream 10000 false Chr11: 11739199-11749198 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300168 5265 Fabidae View MSA
124050600 5270 Rosid View MSA
123619835 5271 Pentapetalae View MSA
122797913 5272 Eudicot View MSA
122047596 5273 Angiosperm View MSA
121310769 5274 Embryophyte View MSA
123348175 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.0696 0.0 3.76441    
cufflinks 1.62309 0.0 5.4653    
cufflinks 12.7817 0.0 34.443   High
cufflinks 3.73111 0.0 11.4438    
cufflinks 4.23101 0.0 12.8279    
cufflinks 8.89602 0.0 24.85   High
cufflinks 1.8469 0.0 6.15814    
cufflinks 0.897489 0.0 3.21836    
cufflinks 3.87094 0.0 11.8943    
cufflinks 0.13011 0.0 0.546484 Low Low
cufflinks 1.85088 0.0 6.17928    

0 Strain